Difference between revisions of "RSNA2012 Planning"

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||6|| Traumatic Brain Injury Case Analysis || [[Media:TBI-DemoScene-RSNA2011.zip  | TBI Demo Data (UCLA)]] ||  [http://wiki.na-mic.org/Wiki/index.php/File:TBISegmentation_TutorialContestSummer2011.pdf TBI tutorial] || ABC Segmentation, Model Maker, Editor, Annotations || Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views || TBD || TBD
 
||6|| Traumatic Brain Injury Case Analysis || [[Media:TBI-DemoScene-RSNA2011.zip  | TBI Demo Data (UCLA)]] ||  [http://wiki.na-mic.org/Wiki/index.php/File:TBISegmentation_TutorialContestSummer2011.pdf TBI tutorial] || ABC Segmentation, Model Maker, Editor, Annotations || Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views || TBD || TBD
 
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||7|| Radiotherapy || [http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1828/popi-plan.tar.gz Plastimatch Dose Warping Data (MGH)] || [http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Plastimatch Tutorial] || Plastimatch, DVH extension (Csaba) || Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,  || TBD || TBD
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||7|| Radiotherapy || [http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1828/popi-plan.tar.gz Plastimatch Dose Warping Data (MGH)] || [http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Plastimatch Tutorial] || Plastimatch, DVH extension (Csaba) || Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,  || Csaba || Andras
 
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||8|| White matter exploration for neurosurgical planning || [[media:WhiteMatterExplorationData.zip‎| White Matter Exploration dataset]]  || [http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Training#Slicer4_Neurosurgical_Planning_Tutorial Neurosurgical planning Tutorial]] || Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker || Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display || TBD || TBD
 
||8|| White matter exploration for neurosurgical planning || [[media:WhiteMatterExplorationData.zip‎| White Matter Exploration dataset]]  || [http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Training#Slicer4_Neurosurgical_Planning_Tutorial Neurosurgical planning Tutorial]] || Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker || Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display || TBD || TBD
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||9|| Longitudinal analysis of meningioma growth||  Change Tracker Data are part of the tutorial || [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf  Quantitative Imaging Tutorial] || Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit || Change Tracker, Volume Rendering, BRAINSFit, CropVolume || TBD || TBD
 
||9|| Longitudinal analysis of meningioma growth||  Change Tracker Data are part of the tutorial || [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf  Quantitative Imaging Tutorial] || Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit || Change Tracker, Volume Rendering, BRAINSFit, CropVolume || TBD || TBD
 
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||10||Image-guided prostate interventions || [[media:RSNA2011_Prostate.zip | Prostate Data updated for Slicer4, in progress]] ''Can load RSNA2010 demo scene, mostly working, see [http://www.na-mic.org/Bug/view.php?id=1523]''|| Pre-op/Intra-op registration; [http://www.na-mic.org/Wiki/index.php/Slicer4:Prostate_mpMRI_review_use_case Use Case Demo] [[media:RSNA2010_Prostate.zip | Prostate Data]]  || Linked Viewing || Annotations, Models, Crosshairs, CompareViews || TBD || TBD
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||10||Image-guided prostate interventions || [[media:RSNA2011_Prostate.zip | Prostate Data updated for Slicer4, in progress]] ''Can load RSNA2010 demo scene, mostly working, see [http://www.na-mic.org/Bug/view.php?id=1523]''|| Pre-op/Intra-op registration; [http://www.na-mic.org/Wiki/index.php/Slicer4:Prostate_mpMRI_review_use_case Use Case Demo] [[media:RSNA2010_Prostate.zip | Prostate Data]]  || Linked Viewing || Annotations, Models, Crosshairs, CompareViews || Nicole || Andrey
 
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||11|| Brain Atlas || [http://www.na-mic.org/publications/item/view/2037 NAC Multi-modality MRI-based Atlas of the Brain] || Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || TBD || TBD
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||11|| Brain Atlas || [http://www.na-mic.org/publications/item/view/2037 NAC Multi-modality MRI-based Atlas of the Brain] || Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || Nicole || Marianna
 
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||12||  Abdomen Atlas|| [http://www.slicer.org/publications/item/view/1953 Knee Atlas] || Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || TBD || TBD
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||12||  Abdomen Atlas|| [http://www.slicer.org/publications/item/view/1953 Knee Atlas] || Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || Nicole || Marianna
 
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||13|| Knee Atlas Atlas ||  [http://www.slicer.org/publications/item/view/1918 Abdominal Atlas]|| Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || TBD || TBD
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||13|| Knee Atlas Atlas ||  [http://www.slicer.org/publications/item/view/1918 Abdominal Atlas]|| Work in progress  - atlases are being updated|| Linked Viewing || Data, Volumes, Models, Scene Views || Nicole || Marianna
 
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Revision as of 20:51, 11 September 2012

Home < RSNA2012 Planning

RSNA hands-on courses

Nb Tutorial slides Datasets Tools Slicer Modules Developer Clinical Expert
Classroom Course 1 - ICIA32, Nov.27, 12:30-2:00 pm 3D Visualization of DICOM Data for Radiology Applications I ICIA 32 dataset Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking Data, Volumes, Models, Scene Views + DICOM ( note: the DICOM part will be a new addition to the slides) Steve Sonia
Classroom Course 2 - ICIA11, Nov.25, 11:00-12:30 pm Quantitative Imaging Tutorial ICIA 11 datasets: PETCTFusion and Change Tracker Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit Change Tracker, Volume Rendering, BRAINSFit, CropVolume} Steve Sonia

Quantitative Imaging Reading Room

Tentative list of demonstrations for the RSNA 2012 Slicer booth. Needs further development and testing Note: RSNA demo machines will need nvidia graphics cards to get GPU Volume Rendering

Nb DEMO Datasets Notes Tools Slicer Modules Developer Clinical Expert
0 3D Visualization of DICOM images for Radiology Applications RSNA datasets 3D Visualization for Radiology Applications Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking Data, Volumes, Models, Scene Views TBD TBD
1 Data Loading and Visualization Slicer3Visualization Data ‎ Slicer4Visualization Tutorial Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking (?) Data, Volumes, Models, Scene Views TBD TBD
2 MRI-based topographic parcellation of human brain EM Segmenter Data registration, segmentation EMSegmenter Tasks EM Segmenter EMSegmenter TBD TBD
3 Volume Rendering #1 Head Head CT Scan (Osirix Manix Dataset) show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views TBD TBD
4 Volume Rendering #2 Abdomen Abdominal CT scan with AAA (Osirix Panoramix Dataset) show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views TBD TBD
5 Volume Rendering #3 Thorax Thoracic CT scan show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views TBD TBD
6 Traumatic Brain Injury Case Analysis TBI Demo Data (UCLA) TBI tutorial ABC Segmentation, Model Maker, Editor, Annotations Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views TBD TBD
7 Radiotherapy Plastimatch Dose Warping Data (MGH) Plastimatch Tutorial Plastimatch, DVH extension (Csaba) Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms, Csaba Andras
8 White matter exploration for neurosurgical planning White Matter Exploration dataset Neurosurgical planning Tutorial] Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display TBD TBD
9 Longitudinal analysis of meningioma growth Change Tracker Data are part of the tutorial Quantitative Imaging Tutorial Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit Change Tracker, Volume Rendering, BRAINSFit, CropVolume TBD TBD
10 Image-guided prostate interventions Prostate Data updated for Slicer4, in progress Can load RSNA2010 demo scene, mostly working, see [1] Pre-op/Intra-op registration; Use Case Demo Prostate Data Linked Viewing Annotations, Models, Crosshairs, CompareViews Nicole Andrey
11 Brain Atlas NAC Multi-modality MRI-based Atlas of the Brain Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views Nicole Marianna
12 Abdomen Atlas Knee Atlas Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views Nicole Marianna
13 Knee Atlas Atlas Abdominal Atlas Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views Nicole Marianna

Process

TODO: how to write a python test for a demo or tutorial


List of Slicer Modules involved in RSNA tutorials & demos

  • Data
  • Welcome to Slicer
  • Volumes
  • Models
  • Scene Views
  • Annotations
  • Volume Rendering
  • Editor
  • Model Maker
  • Diffusion Tensor Estimation
  • Diffusion Tensor Scalar Measurements
  • Tractography Labelmap Seeding
  • Tractography Fiducial Seeding
  • Tractography Display
  • BRAINSTools
  • Change Tracker
  • CropVolume
  • Extensions:
    • ABC
    • Plastimatch
    • EMSegmenter
    • Skull Stripper
    • Reporting
  • Documentation: We need all core modules reasonably well documented.