Difference between revisions of "SDIWG:Meeting Minutes 20080919"

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*Debrief NCBC All Hands Meeting, August 13-15, 2008. Logistics, Planning & Brainstorming discussion (Peter, Karin, All)
 
*Debrief NCBC All Hands Meeting, August 13-15, 2008. Logistics, Planning & Brainstorming discussion (Peter, Karin, All)
 
*Status check on '''three working groups''':  
 
*Status check on '''three working groups''':  
** [[SDIWG:_NCBC_Resource_Yellow_Pages_and_Software_Ontologies|Biositemaps Resourceome]]
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**[[SDIWG:_NCBC_Resource_Yellow_Pages_and_Software_Ontologies|Biositemaps Resourceome]]
*** State of [http://www.biositemap.org Biositemaps] and [[Media:Biositemaps_white_paper_v4.0.doc | Biositemaps white paper v4.0]] (Needs Updating: Peter, Ivo, Daniel).  The underlying technology for Biositemaps is the [http://bioportal.bioontology.org/visualize/38407 Biomedical Resource Ontology (BRO)] and the [http://bmir-protege-dev1.stanford.edu/bro2/ Information Model (IM)]
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***State of [http://www.biositemap.org Biositemaps].  The underlying technology for Biositemaps is the [http://bioportal.bioontology.org/visualize/38407 Biomedical Resource Ontology (BRO)] and the [http://bmir-protege-dev1.stanford.edu/bro2/ Information Model (IM)]
 +
***Plans for adoption within and beyond NCBCs.
 +
***[[Media:Biositemaps_white_paper_v4.0.doc | Biositemaps white paper v4.0]] (Needs Updating: Peter, Ivo, Daniel).
 
** [[SDIWG:_NCBC_Scientific_Ontologies|Scientific Ontologies]]
 
** [[SDIWG:_NCBC_Scientific_Ontologies|Scientific Ontologies]]
 
** [http://www.ncbcs.org/dbp_interactions.html NCBC Driving Biological Projects Interactions and Impact]
 
** [http://www.ncbcs.org/dbp_interactions.html NCBC Driving Biological Projects Interactions and Impact]

Revision as of 22:58, 15 September 2008

Home < SDIWG:Meeting Minutes 20080919

NCBC Joint Working Group Meeting

Top page of SDIWG web site

Notes

Friday September 19, 2008: 2:30-3:30 PM EST
Please contact Peter Lyster for information Peter Lyster
SDIWG Meetings Page
Save the date for the next SDWIG tcon/Connect, three months from now: Friday December 19, 2008

Tcon Agenda


Minutes

  • Note taker: [Suggested order of note takers for future meetings: Will Schroeder (this one); Floratos; Rubin; Jags, Dinov, Murphy, Ku]
  • Review of May 16, 2008 Minutes
  • Attendees:
  • Biositemaps Resourceome Update
  • Scientific Ontologies Update
  • Driving Biological Projects and Impact Update
  • Meeting Schedule:

Action Items

Appendix: Biositemaps white paper

The biositemaps Biositemaps white paper v4.0 presents description of prototype for distributed architecture to address

  • locating,
  • querying,
  • composing or combining, and
  • mining software tools and information resources on the Internet.

Each site which intends to contribute to the inventory instantiates a file on its Internet site ‘biositemap.xml’ which conforms to a defined schema and is tagged by a resource ontology. The prototype schema may be found at http://www.ncbcs.org/biositemaps/biositemaps-v04.xsd A good reference for XML editors is at http://en.wikipedia.org/wiki/Xml_editor e.g., we are using XMLmind. The prototype resource ontology may be found at http://bioontology.org/projects/ontologies/SoftwareOntology/.