Difference between revisions of "Slicer3:Diffusion Editor"

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== Interface ==
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<big>'''Note:''' We are migrating this content to the slicer.org domain - <font color="orange">The newer page is [https://www.slicer.org/wiki/Modules:Volumes:Diffusion_Editor-Documentation  here]</font></big>
This screen shots show how the Interface will look like.
 
 
 
<gallery caption="Interface" widths="200px" heights="200px" perrow="4">
 
Image:DWI_Gradient_Editor.jpg| 1st Version
 
Image:DWI_Gradient_Editor_v2.jpg | 2nd Version, embedded in Slicer3
 
</gallery>
 
 
 
== Goals / What it can (in a while)==
 
 
 
#Load a DWI dataset.
 
**If you load any other type of dataset the DWI Gradient Editor will be disabled.
 
# Choose the Measurement Frame.
 
a. Negative: Select the columns you want to negative.
 
b. Swap: Select two columns you want to swap.
 
c. Rotate: Select one column you want to rotate by an angle you can
 
i. choose from a given set of values.
 
ii. set yourself.
 
#Define the Gradients.
 
** If the DICOM header has the information about the gradients, the editor will put them in the text field.
 
b. If there is no information about the gradients, the GE gradients will be displayed by default.
 
c. You can copy/paste your own gradients in the text field.
 
#Run the test.
 
To see if the chosen parameters are reasonable, you can run a test that computes the
 
Tractography Seeding.
 
#Save the parameters as a NHRD File.
 
#Load an existing NHRD File and run the test.
 
 
 
== How to use the editor ==
 

Latest revision as of 17:37, 10 July 2017

Home < Slicer3:Diffusion Editor

Note: We are migrating this content to the slicer.org domain - The newer page is here