Difference between revisions of "Slicer:Workshops:User Training 101 SPujol"

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= Introduction =
 
= Introduction =
 
This is a training compendium for neuroimage analysis using Slicer2.6.
 
This is a training compendium for neuroimage analysis using Slicer2.6.
You can begin to learn how to
+
This series of course will teach you how to
 
* load and view data
 
* load and view data
 
* segment data and create 3D models
 
* segment data and create 3D models
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* Advanced Training 11: [[Media:SlicerAdvancedTraining11_Registration.ppt|Registration ]]
 
* Advanced Training 11: [[Media:SlicerAdvancedTraining11_Registration.ppt|Registration ]]
  
= Training Datasets =
+
= Training Material =
 +
== Software Tool==
 +
Please follow the [[Slicer:Slicer2.6_Getting_Started|Slicer 2.6 Getting Started]] instructions to install the current version of the Slicer program appropriate to your platform.
 +
== Training Datasets ==
 
* Get these data for Training 1,2,3: [[Media:Tutorial-with-dicom.zip|tutorial_with_dicom.zip]]
 
* Get these data for Training 1,2,3: [[Media:Tutorial-with-dicom.zip|tutorial_with_dicom.zip]]
 
* Get these data for Training 4: [[Media:SlicerSampleDTI.zip|SlicerSampleDTI.zip ]] [[Media:Dwi-dicom.zip|dwi-dicom.zip]]
 
* Get these data for Training 4: [[Media:SlicerSampleDTI.zip|SlicerSampleDTI.zip ]] [[Media:Dwi-dicom.zip|dwi-dicom.zip]]
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* Get these extra set of interoperative data [[Media:Mrt-images.zip| mrt-images.zip]]
 
* Get these extra set of interoperative data [[Media:Mrt-images.zip| mrt-images.zip]]
 
* Get these data for EMSegmenter demonstrations: [[Media:EMSegmentTutorial.zip|EMSegmentTutorial.zip]]
 
* Get these data for EMSegmenter demonstrations: [[Media:EMSegmentTutorial.zip|EMSegmentTutorial.zip]]
 
= Software Installation =
 
 
Please follow the [[Slicer:Slicer2.6_Getting_Started|Slicer 2.6 Getting Started]] instructions to install the current version of the Slicer program appropriate to your platform.
 
  
 
= Slicer Additional Resources =
 
= Slicer Additional Resources =

Revision as of 10:39, 22 May 2007

Home < Slicer:Workshops:User Training 101 SPujol

Introduction

This is a training compendium for neuroimage analysis using Slicer2.6. This series of course will teach you how to

  • load and view data
  • segment data and create 3D models
  • perform Diffusion Tensor Imaging and fMRI analysis

For an overview, dowload this slideshow

Training Compendium

For course related questions, please send an e-mail to Sonia Pujol, Ph.D. (spujol at bwh.harvard.edu).

Excerpts from the Slicer 101 courses: Diffusion Tensor Imaging fiber tractography (top); fMRI activation map (lower-left); automatic brain segmentation (lot).

Training Material

Software Tool

Please follow the Slicer 2.6 Getting Started instructions to install the current version of the Slicer program appropriate to your platform.

Training Datasets

Slicer Additional Resources

A rendering of the Limbic System from the SPL PNL brain atlas

Feedback and Bug reports

Acknowledgements

  • Slicer is being developed by a community of contributors. For more information see the Slicer website.


Back to Training:Main