Difference between revisions of "Special topic breakout: Atlases"

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discuss among the group what topics below of are interest to discuss, and prioritize.
 
discuss among the group what topics below of are interest to discuss, and prioritize.
  
* software infrastructure and conventions for atlasing
+
* define some software infrastructure and conventions for atlases
 
** Providing unique identifiers per structure within any atlas
 
** Providing unique identifiers per structure within any atlas
 
** Providing a mapping from structure to unique color
 
** Providing a mapping from structure to unique color
 
** Providing mappings from local identifiers to names/IDs in official ontologies, and common synonyms
 
** Providing mappings from local identifiers to names/IDs in official ontologies, and common synonyms
 
** Developing and representing structural and functional relationships
 
** Developing and representing structural and functional relationships
* means for cross-atlas indexing
+
** Developing tools to perform cross-atlas indexing
* tools to display hierarchical relationships between structures, superstructures and substructures
+
* means for co-registering and overlaying experimental data (parametric maps)
(still working on this)
+
* interactive tools for displaying labels in various nomenclatures on mouseover
 +
* tools to do point-based and region-based indexing
 +
* tools to display and navigate hierarchical relationships between structures, superstructures and substructures
 +
* other useful interactive tools?
 +
...

Revision as of 20:04, 31 May 2007

Home < Special topic breakout: Atlases





Atlases Breakout Session

June 26th, 3-4pm

Location: Grier Rooms A & B: 34-401A & 34-401B





Attendees:

  • Gary Christensen
  • Wendy Plesniak
  • Brad Davis
  • Florin Talos
  • Michael Halle

Agenda: discuss among the group what topics below of are interest to discuss, and prioritize.

  • define some software infrastructure and conventions for atlases
    • Providing unique identifiers per structure within any atlas
    • Providing a mapping from structure to unique color
    • Providing mappings from local identifiers to names/IDs in official ontologies, and common synonyms
    • Developing and representing structural and functional relationships
    • Developing tools to perform cross-atlas indexing
  • means for co-registering and overlaying experimental data (parametric maps)
  • interactive tools for displaying labels in various nomenclatures on mouseover
  • tools to do point-based and region-based indexing
  • tools to display and navigate hierarchical relationships between structures, superstructures and substructures
  • other useful interactive tools?

...