Difference between revisions of "User:Inorton"

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Isaiah Norton, Golby Lab, Department of Neurosurgery
 
  
contact: [mailto:inorton@bwhd-tharvardd0tedu inorton @bwh d-t harvard d0t edu]
 
 
===Slicer Notes===
 
 
Things that aren't fleshed-out enough to go into Mantis, or if I can't fully reproduce yet, can't share the data right now, etc..
 
 
==Bugs==
 
 
*Can't load high-res MEMPRAGE MRI from MGH for AG case in Slicer3. workaround: loaded fine in slicer2, then saved as nrrd.
 
 
==Feature Wishes==
 
 
*Better transform handling in the registration code: should sort out any hierarchies for cross-registration (ie, want to register to something that is already inside another transform)
 
 
*Put models inside appropriate transform after generation
 
 
*Editing volume inside of transform - don't want to have to move volumes out every time to change labelmaps in a complex scene.
 
 
*Tract (hyperstreamline) intersection with MR planes (highlighted with color change, ring, etc.)
 
 
*Slice intersections in 3D viewer (helps with depth perception).
 
 
==Thoughts==
 
*[[User:inorton:Slicer4DTI | DTI in Slicer4]]
 
 
==How-to-do-this==
 
 
*[LoadBrainPointsIntoSlicer]
 
 
===Slicer4 links===
 
*http://www.slicer.org/slicerWiki/index.php/Slicer4:Developers
 
*http://www.slicer.org/slicerWiki/index.php/Slicer4:QtPort
 
*http://www.slicer.org/slicerWiki/index.php/Slicer4:QtPort/Tutorials
 
 
===Other Notes===
 
 
[[Slicer3SuperBuildWindows7|SuperBuilding Slicer3 on Windows 7]]
 
 
[[Slicer3WrapITKPython|Slicer3 with WrapITK for Python ITK wrapping]]
 
 
[[Tidbits]]
 
 
[[UseIntelMKLwithMatlabForFasterSPM]]
 
 
[[ExternalConnectionsToSPL]]
 
 
[[LinuxScreenCaptureMovieNotes]]
 
 
[[CTPhantomSegmentation]]
 
 
[[LoadAnalyzeIntoBrainLab]]
 
 
[[LoadfMRIIntoInstaTrak]]
 
 
[[ImageConversionUtilities]]
 

Latest revision as of 20:17, 13 July 2018