Difference between revisions of "IGT:ToolKit/Navigation-tutorial"
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| + | [[Image:IGTBasicNavigationSummary.png|300px|thumb]] | ||
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Back to [[IGT:ToolKit|IGT:ToolKit]] | Back to [[IGT:ToolKit|IGT:ToolKit]] | ||
| − | + | =Basic Slicer3 Navigation Tutorial= | |
| − | * Slicer3 | + | |
| − | + | ==Overview:== | |
| − | * IGSTK | + | |
| − | * | + | This tutorial uses a tracking simulator to explain how navigation works in Slicer3. |
| + | |||
| + | A general IGT navigation system consists of the following components: | ||
| + | * Slicer3 - the base platform | ||
| + | * IGSTK - an interfacing tool for common commercial tracking devices | ||
| + | * A tracking device - such as the NDI Aurora magnetic tracking system | ||
| + | |||
| + | The tracking simulator simulates the tracking device and the IGSTK interfacing software. | ||
| + | |||
| + | Those wishing to connect a real tracking system to Slicer3 should see the [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Navigation-with-Aurora Advanced Navigation Tutorial]. | ||
| − | + | ==Tutorial Materials== | |
| + | * [[Media:IGTBasicNavigation.pdf|Tutorial slides]] for the Basic Navigation Tutorial | ||
| + | * Atlas: download the .zip file from either the [http://www.na-mic.org/pages/Special:PubDB_View?dspaceid=1265 SPL-PNL Brain Atlas] or the [http://www.spl.harvard.edu/pages/Special:PubDB_View?dspaceid=1266 SPL Abdominal Atlas] | ||
| + | * [[Media:Tool.vtk|Tool model]] (right-click to download) | ||
| + | ** If Windows saves the file as Tool.htm intstead of Tool.vtk: Select Start->Run, type "cmd", type "cd <directory where Tool.htm is>", type "move Tool.htm Tool.vtk" | ||
| + | ==Software Installation Instructions== | ||
=== '''Step 1: Install Slicer3''' === | === '''Step 1: Install Slicer3''' === | ||
| − | Go to the [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Install-Slicer3 Slicer3 Install] site. | + | * Go to the [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Install-Slicer3 Slicer3 Install] site. |
| − | + | * Download a Slicer binary for your platform. | |
| − | + | * Install Slicer. | |
| − | |||
| − | * | ||
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| − | ==='''Step | + | ==='''Step 2: Install the tracker simulator'''=== |
The tracking simulator will be used to generate and send fake tracking data to Slicer3. | The tracking simulator will be used to generate and send fake tracking data to Slicer3. | ||
| − | * You have the choice of either downloading a precompiled version '''OR''' building it yourself from the source code: | + | * You have the choice of either downloading a precompiled version (binary) '''OR''' building it yourself from the source code: |
** Precompiled tracking simulator: Download and unzip. | ** Precompiled tracking simulator: Download and unzip. | ||
| − | *** [[Media: | + | *** [[Media:TrackerClient_Win_x86_32.zip|For Windows (32-bit)]]. |
*** [[Media:TrackerSimulator_Darwin_x86.tgz |For Mac OS X(x86)]]. | *** [[Media:TrackerSimulator_Darwin_x86.tgz |For Mac OS X(x86)]]. | ||
| − | *** [[Media: | + | *** [[Media:TrackerClient_Linux_x86_32.tgz|For Linux (x86, 32-bit)]]. |
| − | *** [[Media: | + | *** [[Media:TrackerClient_Linux_x86_64.tgz|For Linux (x86, 64-bit)]]. |
** Building the tracker simulator from source code: [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Build-Tracker-Simulator Find the instructions here] | ** Building the tracker simulator from source code: [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Build-Tracker-Simulator Find the instructions here] | ||
| + | |||
| + | ==People== | ||
| + | * [http://www.spl.harvard.edu/pages/People/tokuda Junichi Tokuda] | ||
| + | * [http://www.spl.harvard.edu/pages/People/hliu Haiying Liu] | ||
| + | * [http://www.spl.harvard.edu/pages/People/noby Nobuhiko Hata] | ||
| + | * [http://www.spl.harvard.edu/pages/People/dpace Danielle Pace] | ||
Latest revision as of 16:06, 10 April 2009
Home < IGT:ToolKit < Navigation-tutorial
Back to IGT:ToolKit
Contents
Overview:
This tutorial uses a tracking simulator to explain how navigation works in Slicer3.
A general IGT navigation system consists of the following components:
- Slicer3 - the base platform
- IGSTK - an interfacing tool for common commercial tracking devices
- A tracking device - such as the NDI Aurora magnetic tracking system
The tracking simulator simulates the tracking device and the IGSTK interfacing software.
Those wishing to connect a real tracking system to Slicer3 should see the Advanced Navigation Tutorial.
Tutorial Materials
- Tutorial slides for the Basic Navigation Tutorial
- Atlas: download the .zip file from either the SPL-PNL Brain Atlas or the SPL Abdominal Atlas
- Tool model (right-click to download)
- If Windows saves the file as Tool.htm intstead of Tool.vtk: Select Start->Run, type "cmd", type "cd <directory where Tool.htm is>", type "move Tool.htm Tool.vtk"
Software Installation Instructions
Step 1: Install Slicer3
- Go to the Slicer3 Install site.
- Download a Slicer binary for your platform.
- Install Slicer.
Step 2: Install the tracker simulator
The tracking simulator will be used to generate and send fake tracking data to Slicer3.
- You have the choice of either downloading a precompiled version (binary) OR building it yourself from the source code:
- Precompiled tracking simulator: Download and unzip.
- Building the tracker simulator from source code: Find the instructions here
