Difference between revisions of "October 08 2009 Meeting: VT-NAMIC Revised atlas construction workflow"
From NAMIC Wiki
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# Prepare the data using the instructions -- LINK | # Prepare the data using the instructions -- LINK | ||
# Gradient anisotropic diffusion -- PARAMETERS | # Gradient anisotropic diffusion -- PARAMETERS | ||
| − | # BRAINSFit initial registration -- PARAMETERS -- failure to recover the pose for Hugo and Valentino | + | # BRAINSFit initial registration -- PARAMETERS -- failure to recover the pose for Hugo and Valentino (both have severe head tilt in all three planes) |
# Manual pose alignment for Hugo and Valentino | # Manual pose alignment for Hugo and Valentino | ||
Revision as of 19:33, 8 October 2009
Home < October 08 2009 Meeting: VT-NAMIC Revised atlas construction workflowTODOs
- link the software tools and scripts with the workflow
- prepare a branch in the sandbox with the tools not available in Slicer (confirm with Chris copyright issues)
Software
- Slicer/extensions versioning
Workflow
- Prepare the data using the instructions -- LINK
- Gradient anisotropic diffusion -- PARAMETERS
- BRAINSFit initial registration -- PARAMETERS -- failure to recover the pose for Hugo and Valentino (both have severe head tilt in all three planes)
- Manual pose alignment for Hugo and Valentino
