Difference between revisions of "Projects:ARRA:SlicerEM:Developer:ExampleWorkflow"

From NAMIC Wiki
Jump to: navigation, search
m
 
(5 intermediate revisions by one other user not shown)
Line 1: Line 1:
 
[[Projects:ARRA:SlicerEM:Developer|Back to SlicerEM:Developer page]]
 
[[Projects:ARRA:SlicerEM:Developer|Back to SlicerEM:Developer page]]
  
−
<gallery heights=300px widths=350px perrow=3 caption="MRI Human brain workflow">
+
= Advanced mode =
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1.png|Step1 - Define Task
+
 
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1b.png|Step1b - Define Task
+
{| cellspacing="0" border="1"
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step2.png|Step2 - Define imput channels
+
|- bgcolor="#abcdef"
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step3.png|Step3 - Define anatomical tree
+
! What || KWWidget !! Qt
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step4.png|Step4 - Define atlas
+
|-
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step5.png|Step5 - Edit Registration parameters
+
| Step1 - Define Task || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep1.png‎]]
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step6.png|Step6 - Define preprocessing
+
|-
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step7.png|Step6b - Define preprocessing
+
| Step1b - Define Task || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1b.png]] || NA
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step8.png|Step7 - Specify Intensity Distribution
+
|-
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step9.png|Step8 - Edit node-based parameters
+
| Step2 - Define input channels || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step2.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep2.png‎]]
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10.png|Step9 - Run Segmentation
+
|-
−
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10_3DView.png|Step9 (3DView)
+
| Step3 - Define anatomical tree || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step3.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep3.png‎]]
−
</gallery>
+
|-
 +
| Step4 - Define atlas ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step4.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep4.png‎]]
 +
|-
 +
| Step5 - Edit Registration parameters ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step5.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep5.png‎]]
 +
|-
 +
| Step6 - Define preprocessing ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step6.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep6.png‎]]
 +
|-
 +
| Step7 - Specify Intensity Distribution ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step8.png‎]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep7.png‎]]
 +
|-
 +
| Step7b - Plot class Distribution ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step8b ClassDistributionGraph.png]] || NA
 +
|-
 +
| Step8 - Edit node-based parameters||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step9.png]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep8.png‎]]
 +
|-
 +
| Step9 - Run Segmentation ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10.png]] || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_Qtstep9.png‎]]
 +
|-
 +
| Step9 (3DView) ||[[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10_3DView.png]] || NA
 +
|-
 +
|}
 +
 
 +
= Simple mode =
 +
 
 +
{| cellspacing="0" border="1"
 +
|- bgcolor="#abcdef"
 +
! What || KWWidget !! Qt
 +
|-
 +
| Step1 - Define Task || See step1 || NA
 +
|-
 +
| Step2 - Define input channels || [[Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step_SimpleMode.png‎]] || NA
 +
|-
 +
|}

Latest revision as of 16:49, 19 August 2010

Home < Projects:ARRA:SlicerEM:Developer:ExampleWorkflow

Back to SlicerEM:Developer page

Advanced mode

What KWWidget Qt
Step1 - Define Task Projects-ARRA-SlicerEM-Developer-EMSegment step1.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep1.png
Step1b - Define Task Projects-ARRA-SlicerEM-Developer-EMSegment step1b.png NA
Step2 - Define input channels Projects-ARRA-SlicerEM-Developer-EMSegment step2.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep2.png
Step3 - Define anatomical tree Projects-ARRA-SlicerEM-Developer-EMSegment step3.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep3.png
Step4 - Define atlas Projects-ARRA-SlicerEM-Developer-EMSegment step4.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep4.png
Step5 - Edit Registration parameters Projects-ARRA-SlicerEM-Developer-EMSegment step5.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep5.png
Step6 - Define preprocessing Projects-ARRA-SlicerEM-Developer-EMSegment step6.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep6.png
Step7 - Specify Intensity Distribution Projects-ARRA-SlicerEM-Developer-EMSegment step8.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep7.png
Step7b - Plot class Distribution Projects-ARRA-SlicerEM-Developer-EMSegment step8b ClassDistributionGraph.png NA
Step8 - Edit node-based parameters Projects-ARRA-SlicerEM-Developer-EMSegment step9.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep8.png
Step9 - Run Segmentation Projects-ARRA-SlicerEM-Developer-EMSegment step10.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep9.png
Step9 (3DView) Projects-ARRA-SlicerEM-Developer-EMSegment step10 3DView.png NA

Simple mode

What KWWidget Qt
Step1 - Define Task See step1 NA
Step2 - Define input channels Projects-ARRA-SlicerEM-Developer-EMSegment step SimpleMode.png NA
Retrieved from "https://www.na-mic.org/w/index.php?title=Projects:ARRA:SlicerEM:Developer:ExampleWorkflow&oldid=57222"