Projects:ARRA:SlicerEM:Developer:ExampleWorkflow

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Advanced mode

What KWWidget Qt
Step1 - Define Task Projects-ARRA-SlicerEM-Developer-EMSegment step1.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep1.png
Step1b - Define Task Projects-ARRA-SlicerEM-Developer-EMSegment step1b.png NA
Step2 - Define input channels Projects-ARRA-SlicerEM-Developer-EMSegment step2.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep2.png
Step3 - Define anatomical tree Projects-ARRA-SlicerEM-Developer-EMSegment step3.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep3.png
Step4 - Define atlas Projects-ARRA-SlicerEM-Developer-EMSegment step4.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep4.png
Step5 - Edit Registration parameters Projects-ARRA-SlicerEM-Developer-EMSegment step5.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep5.png
Step6 - Define preprocessing Projects-ARRA-SlicerEM-Developer-EMSegment step6.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep6.png
Step7 - Specify Intensity Distribution Projects-ARRA-SlicerEM-Developer-EMSegment step8.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep7.png
Step7b - Plot class Distribution Projects-ARRA-SlicerEM-Developer-EMSegment step8b ClassDistributionGraph.png NA
Step8 - Edit node-based parameters Projects-ARRA-SlicerEM-Developer-EMSegment step9.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep8.png
Step9 - Run Segmentation Projects-ARRA-SlicerEM-Developer-EMSegment step10.png Projects-ARRA-SlicerEM-Developer-EMSegment Qtstep9.png
Step9 (3DView) Projects-ARRA-SlicerEM-Developer-EMSegment step10 3DView.png NA

Simple mode

What KWWidget Qt
Step1 - Define Task See step1 NA
Step2 - Define input channels Projects-ARRA-SlicerEM-Developer-EMSegment step SimpleMode.png NA