Difference between revisions of "Projects:QIN:3D Slicer Annotation Image Markup:DICOM-based annotations"
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Back to [[AIM Annotations integration with 3DSlicer]] | Back to [[AIM Annotations integration with 3DSlicer]] | ||
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| + | This page is used to collect examples of the valid DICOM SR annotations. | ||
=syngo.via= | =syngo.via= | ||
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* Screenshot showing placed annotations and available markup tools | * Screenshot showing placed annotations and available markup tools | ||
| − | + | <gallery widths="300px" perrow="3"> | |
| + | Image:syngo_via_annotations.png| GUI showing annotation elements | ||
| + | Image:syngo_via_annotations_options.png|Available markup tools | ||
| + | Image:syngo_via_annotations_results.png|DICOM SR reports side by side with the input imaging data | ||
| + | </gallery> | ||
| − | [[Image: | + | * zip-file with the input data and the created annotations [[Image:CT_head_syngo_annotated.zip]] |
| − | + | * the produced DICOM SR objects produce errors while trying to read using DCMTK SR tools (dsrdump). There appears to be a bug in DICOM SR functionality implementation of syngo.via, see this thread: http://forum.dcmtk.org/viewtopic.php?p=13207#13207 | |
| − | * | + | * NOTE: the non-compliant storage of SR object has been observed on a specific version of syngo.via available at our institution. We hope this issue has been resolved in the next release (VM11), and we are waiting for it to become available so that we can confirm this. |
=Advantage Workstation= | =Advantage Workstation= | ||
| − | + | Status unknown | |
| + | |||
| + | =DICOM SEG= | ||
| + | It was confirmed that the following tools are not capable of reading DICOM SEG data produced by syngo.via: | ||
| + | * Osirix 4.1 | ||
| + | * Mevislab 2.1 | ||
| + | * synedra personal view 3.1.04 x64 | ||
| + | * ClearCanvas 2 SP1 | ||
| + | * ImageJ 1.45s | ||
| + | |||
| + | =QIBA VolCT dataset= | ||
| + | |||
| + | * Details http://qibawiki.rsna.org/index.php?title=VolCT_-_Group_1C#Downloadable_Images_and_Data_Sets | ||
| + | * Data available from http://thecancerimagingarchive.net | ||
Latest revision as of 17:05, 6 June 2012
Home < Projects:QIN:3D Slicer Annotation Image Markup:DICOM-based annotationsBack to AIM Annotations integration with 3DSlicer
This page is used to collect examples of the valid DICOM SR annotations.
syngo.via
- Input dataset: CT head, distributed as part of testing data with Slicer: http://viewvc.slicer.org/viewvc.cgi/Slicer3/trunk/Testing/Data/Input/CTHeadAxialDicom/
- Screenshot showing placed annotations and available markup tools
GUI showing annotation elements
Available markup tools
DICOM SR reports side by side with the input imaging data
- zip-file with the input data and the created annotations File:CT head syngo annotated.zip
- the produced DICOM SR objects produce errors while trying to read using DCMTK SR tools (dsrdump). There appears to be a bug in DICOM SR functionality implementation of syngo.via, see this thread: http://forum.dcmtk.org/viewtopic.php?p=13207#13207
- NOTE: the non-compliant storage of SR object has been observed on a specific version of syngo.via available at our institution. We hope this issue has been resolved in the next release (VM11), and we are waiting for it to become available so that we can confirm this.
Advantage Workstation
Status unknown
DICOM SEG
It was confirmed that the following tools are not capable of reading DICOM SEG data produced by syngo.via:
- Osirix 4.1
- Mevislab 2.1
- synedra personal view 3.1.04 x64
- ClearCanvas 2 SP1
- ImageJ 1.45s
