Difference between revisions of "Project Week 25/Tracked-Ultrasound-Standardization-IV"

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__NOTOC__
 
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Back to [[Project_Week_25#Projects|Projects List]]
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Back to [[Project_Week_25#Projects|Projects List]]
 
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==Key Investigators==
 
==Key Investigators==
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* [http://nist.mni.mcgill.ca/?page_id=369 Simon Drouin] (Montreal Neurological Institute, Canada)
 
* [http://nist.mni.mcgill.ca/?page_id=369 Simon Drouin] (Montreal Neurological Institute, Canada)
 
* [http://perk.cs.queensu.ca/users/lasso Andras Lasso] (Queen's University, Canada)
 
* [http://perk.cs.queensu.ca/users/lasso Andras Lasso] (Queen's University, Canada)
 
* [http://perk.cs.queensu.ca/users/pinter Csaba Pinter] (Queen's University, Canada)
 
* [http://perk.cs.queensu.ca/users/pinter Csaba Pinter] (Queen's University, Canada)
 
* [http://www.sintef.no/en/all-employees/employee/?empId=541 Ole Vegard Solberg] (SINTEF, Norway)
 
* [http://www.sintef.no/en/all-employees/employee/?empId=541 Ole Vegard Solberg] (SINTEF, Norway)
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* [http://www.ap-lab.ca/people/ Etienne Leger] (Applied Perception Lab, Concordia University, Canada )
 
* Longquan Chen (electronically) (Brigham and Women's Hospital, Harvard Medical School, USA)
 
* Longquan Chen (electronically) (Brigham and Women's Hospital, Harvard Medical School, USA)
 
* [http://www.imaging.robarts.ca/petergrp/node/113 Adam Rankin] (electronically) (Robarts Research Institute, Canada)
 
* [http://www.imaging.robarts.ca/petergrp/node/113 Adam Rankin] (electronically) (Robarts Research Institute, Canada)
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<!-- Objective bullet points -->
 
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* [http://www.plustoolkit.org Plus toolkit] provides access to numerous hardware devices (imaging devices, tracking devices, navigations systems, sensors, etc.) and makes it available through [http://www.openigtlink.org OpenIGTLink] protocol
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* Create a common library, [http://igsio.github.io OpenIGTLinkIO] that makes communication with Plus (and OpenIGTLink-compatible devices or software) very simple:
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Like this.
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** Ensure software interoperability
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** Share software maintenance workload
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** Make it easy to share new features
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* Add specific features for tracked ultrasound and and augmented reality in surgical navigation
 
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<!-- Approach and Plan bullet points -->
 
<!-- Approach and Plan bullet points -->
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* Improve message header sent by Plus Toolkit for US machines(Ole Vegar, Simon)
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* Build a complete US session simulation (OpenIGTLinkIO motifs, Plus config, Automated tests)  (Ole Vega, Simon)
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* Add missing functionality in OpenIGTLinkIO to complete reintegration in OpenIGTLinkIF (Simon, Longquan )
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* Improve support to launch Plus server remotely (Csaba + Andras)
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* Adapt OpenIGTLinkIO to handle video compression functionality added to OpenIGTLink (Etienne + Longquan + Adam)
 
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<!-- Progress and Next steps (fill out at the end of project week) -->
 
<!-- Progress and Next steps (fill out at the end of project week) -->
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* Progress in OpenIGTLinkIO (changes in [https://github.com/SINTEFMedtek/OpenIGTLinkIO/tree/feature/CX-114-support-for-openigtlink3 branch on SINTEF's fork] of OpenIGTLinkIO )
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** Simplified handling of command messages in OpenIGTLinkIO.
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** US parameters are now in the header of each image header.
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* Created a US simulation session where 2 parameters (depth and frequency) of the US machine can be remotely controlled. (TODO: put file here)
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* Added support for video streaming (including compression) in OpenIGTLinkIO (Lonquan, remotely). Changes are in Longquan's fork [https://github.com/leochan2009/OpenIGTLinkIO master branch].
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* Remote change of ultrasound parameters. Topic branch: https://github.com/cpinter/PlusLib/tree/set-us-parameters-command
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** New command to Plus called vtkPlusSetUsParameterCommand
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** Received command is propagated to the ultrasound device and parameter change is requested
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** Example command syntax: <Command Name="SetFrequencyMhz" ParameterDoubleValue="4" /> (Parameter argument not final)
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* Next step
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** Polish code and merge SINTEF's and Longquan's master branch for OpenIGTLinkIO and Csaba's topic branch in Plus.
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** Add support (both in Plus and OpenIGTLinkIO) for automatic probing of US machine capabilities and settable parameters.
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** Finish the work on remote Plus server launch.
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** Build an auto-populated GUI to control US machine in OpenIGTLinkIO. GUI is populated according to parameters recovered from probing US machine remotely
  
 
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==Illustrations==
 
==Illustrations==
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Remote change of ultrasound imaging parameters:
  
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{| class="wikitable"
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! style="text-align: left; width:50%" |  [[image:20170629_RemoteUsParameterChange1.png|400px]]
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! style="text-align: left; width:50%" |  [[image:20170629_RemoteUsParameterChange6.png|400px]]
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! style="text-align: left; width:50%" |  [[image:20170629_RemoteUsParameterChange_Small.gif|400px]] Click image to see animation
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|- style="vertical-align:top;"
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|}
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Progress of the project during past project weeks:
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{| class="wikitable"
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! style="text-align: left; width:50%" |  [[image:1-before-winter-2016.jpeg|400px]]
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! style="text-align: left; width:50%" |  [[image:2-winter-2016.jpeg|400px]]
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|- style="vertical-align:top;"
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[[image:3-summer-2016.jpeg|400px]]
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[[image:4-winter-2017.jpeg|400px]]
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|}
  
 
==Background and References==
 
==Background and References==
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*Winter 2017 [[2017_Winter_Project_Week/Tracked_Ultrasound_Standardization | project page ]]
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*Winter 2016 [[2016_Winter_Project_Week/Projects/TrackedUltrasoundStandardization | project page]]
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*Summer 2016 [[ 2016 Summer Project Week/Tracked Ultrasound Standardization | project page]]
 
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data -->
 
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data -->

Latest revision as of 08:53, 30 June 2017

Home < Project Week 25 < Tracked-Ultrasound-Standardization-IV

Back to Projects List

Key Investigators

  • Simon Drouin (Montreal Neurological Institute, Canada)
  • Andras Lasso (Queen's University, Canada)
  • Csaba Pinter (Queen's University, Canada)
  • Ole Vegard Solberg (SINTEF, Norway)
  • Etienne Leger (Applied Perception Lab, Concordia University, Canada )
  • Longquan Chen (electronically) (Brigham and Women's Hospital, Harvard Medical School, USA)
  • Adam Rankin (electronically) (Robarts Research Institute, Canada)

Project Description

Objective Approach and Plan Progress and Next Steps
  • Plus toolkit provides access to numerous hardware devices (imaging devices, tracking devices, navigations systems, sensors, etc.) and makes it available through OpenIGTLink protocol
  • Create a common library, OpenIGTLinkIO that makes communication with Plus (and OpenIGTLink-compatible devices or software) very simple:
    • Ensure software interoperability
    • Share software maintenance workload
    • Make it easy to share new features
  • Add specific features for tracked ultrasound and and augmented reality in surgical navigation
  • Improve message header sent by Plus Toolkit for US machines(Ole Vegar, Simon)
  • Build a complete US session simulation (OpenIGTLinkIO motifs, Plus config, Automated tests) (Ole Vega, Simon)
  • Add missing functionality in OpenIGTLinkIO to complete reintegration in OpenIGTLinkIF (Simon, Longquan )
  • Improve support to launch Plus server remotely (Csaba + Andras)
  • Adapt OpenIGTLinkIO to handle video compression functionality added to OpenIGTLink (Etienne + Longquan + Adam)
  • Progress in OpenIGTLinkIO (changes in branch on SINTEF's fork of OpenIGTLinkIO )
    • Simplified handling of command messages in OpenIGTLinkIO.
    • US parameters are now in the header of each image header.
  • Created a US simulation session where 2 parameters (depth and frequency) of the US machine can be remotely controlled. (TODO: put file here)
  • Added support for video streaming (including compression) in OpenIGTLinkIO (Lonquan, remotely). Changes are in Longquan's fork master branch.
  • Remote change of ultrasound parameters. Topic branch: https://github.com/cpinter/PlusLib/tree/set-us-parameters-command
    • New command to Plus called vtkPlusSetUsParameterCommand
    • Received command is propagated to the ultrasound device and parameter change is requested
    • Example command syntax: <Command Name="SetFrequencyMhz" ParameterDoubleValue="4" /> (Parameter argument not final)
  • Next step
    • Polish code and merge SINTEF's and Longquan's master branch for OpenIGTLinkIO and Csaba's topic branch in Plus.
    • Add support (both in Plus and OpenIGTLinkIO) for automatic probing of US machine capabilities and settable parameters.
    • Finish the work on remote Plus server launch.
    • Build an auto-populated GUI to control US machine in OpenIGTLinkIO. GUI is populated according to parameters recovered from probing US machine remotely

Illustrations

Remote change of ultrasound imaging parameters:

20170629 RemoteUsParameterChange1.png 20170629 RemoteUsParameterChange6.png 20170629 RemoteUsParameterChange Small.gif Click image to see animation

Progress of the project during past project weeks:

1-before-winter-2016.jpeg 2-winter-2016.jpeg

3-summer-2016.jpeg

4-winter-2017.jpeg

Background and References

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