Difference between revisions of "2009 Summer Project Week Slicer3 Brainlab Introduction"
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| − | Image:PW2009-v3.png|[[2009_Summer_Project_Week|Project Week Main Page]] | + | Image:PW2009-v3.png|[[2009_Summer_Project_Week#Projects|Project Week Main Page]] |
Image:Slicer_dti_seeding_or.jpg|Slicer3 in OR for fiducial seeding of DTI tractography | Image:Slicer_dti_seeding_or.jpg|Slicer3 in OR for fiducial seeding of DTI tractography | ||
Image:Slicer_dti_seeding.png|Slicer3 fiducial seeding of DTI tractography | Image:Slicer_dti_seeding.png|Slicer3 fiducial seeding of DTI tractography | ||
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==Key Investigators== | ==Key Investigators== | ||
| − | * BWH: Haiying Liu | + | * BWH: Haiying Liu, Isaiah Norton, Junichi Tokuda, Alex Golby, Noby Hata, Tina Kapur, Haytham Elhawary |
| + | * Isomics: Steve Pieper | ||
* Yale: Xenios Papademetris | * Yale: Xenios Papademetris | ||
* BrainLab: Pratik Patel | * BrainLab: Pratik Patel | ||
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<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | Introduce how we integrate BrainLab, BioImage Suite and Slicer3 to perform fiducial seeding of DTI tractography in Slicer3. | + | Introduce and demonstrate how we integrate BrainLab, BioImage Suite and Slicer3 to perform fiducial seeding of DTI tractography in Slicer3. |
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<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication. | + | *Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication. |
| + | *It's probably a good idea to show step by step how we set up the system. Instructions can also be found here at: https://www.slicer.org/wiki/Slicer3:BrainLab_Integration | ||
</div> | </div> | ||
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<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | + | * Performed demonstration (with great help from Yale team and BrainLab) this week. | |
| − | + | * Five participants. | |
| + | * Launching BWH-UCLA collaboration based this work. | ||
</div> | </div> | ||
</div> | </div> | ||
Latest revision as of 17:23, 10 July 2017
Home < 2009 Summer Project Week Slicer3 Brainlab Introduction
Slicer3 in OR for fiducial seeding of DTI tractography
Slicer3 fiducial seeding of DTI tractography
Key Investigators
- BWH: Haiying Liu, Isaiah Norton, Junichi Tokuda, Alex Golby, Noby Hata, Tina Kapur, Haytham Elhawary
- Isomics: Steve Pieper
- Yale: Xenios Papademetris
- BrainLab: Pratik Patel
- UCLA: Nathan Hageman
Objective
Introduce and demonstrate how we integrate BrainLab, BioImage Suite and Slicer3 to perform fiducial seeding of DTI tractography in Slicer3.
Approach, Plan
- Slicer3, BioImage Suite and BrainLab will be connected through a router in BWH OR. BioImage Suite will be a "bridge" between Slicer3 and BrainLab for data communication.
- It's probably a good idea to show step by step how we set up the system. Instructions can also be found here at: https://www.slicer.org/wiki/Slicer3:BrainLab_Integration
Progress
- Performed demonstration (with great help from Yale team and BrainLab) this week.
- Five participants.
- Launching BWH-UCLA collaboration based this work.
