Difference between revisions of "Projects:RegistrationDocumentation:RegLibDataList"
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Back to [[Projects:ARRASuplements|ARRA main page]], [[Projects:RegistrationDocumentation|Registration main page]] | Back to [[Projects:ARRASuplements|ARRA main page]], [[Projects:RegistrationDocumentation|Registration main page]] | ||
| − | + | Below is a list of all the currently downloadable Registration Case Library files. This list is under active development and is expected to grow and change (Feb. 2010 to Oct. 2011). For a detailed description of each case please visit [[Projects:RegistrationDocumentation:UseCaseInventory|the Library Main Page]]. Files are zip archives containing images in NRRD format, Slicer3 scene files and presets and guided tutorials in PowerPoint or Movie format. You can also find these files mirrored on the '''[http://www.insight-journal.org/midas/item/view/2332 MIDAS database]''' | |
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| + | *[[Media:RegLib_Case_01_TumorGrowth.zip|'''Registration Library Case 01: Brain Tumor Growth''' <small>(full package, zip file 34 MB)</small> ]] | ||
**[[Media:RegPreset_RegUC-001.txt|Registration Library Case 01: registration parameter presets file <small> (MRML file, import as scene) </small>]] | **[[Media:RegPreset_RegUC-001.txt|Registration Library Case 01: registration parameter presets file <small> (MRML file, import as scene) </small>]] | ||
**[[Media:RegLib_C01_Data_TumorGrowth.zip|Registration Library Case 01: image dataset only <small>(NRRD, 11 MB, filename: RegLib_C01_Data_TumorGrowth.zip) </small>]] | **[[Media:RegLib_C01_Data_TumorGrowth.zip|Registration Library Case 01: image dataset only <small>(NRRD, 11 MB, filename: RegLib_C01_Data_TumorGrowth.zip) </small>]] | ||
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**[[Media:RegInstr_RegUC-001.txt|Registration Library Case 01: step-by step text instructions <small>(rtf text file) </small>]] | **[[Media:RegInstr_RegUC-001.txt|Registration Library Case 01: step-by step text instructions <small>(rtf text file) </small>]] | ||
**[[Media:RegLib_C01_TumorGrowth_MultiresSolution_Dec09.zip|Registration Library Case 01: Multiresolution testresult package <small> (Data,Xform, Solution, zip file 17 MB) </small>]] | **[[Media:RegLib_C01_TumorGrowth_MultiresSolution_Dec09.zip|Registration Library Case 01: Multiresolution testresult package <small> (Data,Xform, Solution, zip file 17 MB) </small>]] | ||
| − | *'''[[Media:RegLib_03_DTIExample_full.zip|Registration Library Case 03: DTI to baseline <small> (Data,Presets,Tutorial, Solution, zip file 24 MB) </small>]]''' | + | *[[Media:RegLib_C02_DATA.zip|'''Registration Library Case 02: MSBrain intra-subject multi-contrast: FLAIR+lesion segmentation to SPGR + mask''' <small> (Data,Presets, Solution, zip file 27 MB) </small>]] |
| − | + | *[[Media:RegLib_03_DTIExample_full.zip|'''Registration Library Case 03: DTI to baseline''' <small> (Data,Presets,Tutorial, Solution, zip file 24 MB) </small>]] | |
| − | + | *[[Media:RegLib_C04_Data.zip|'''Registration Library Case 04: MS Multi-contrast series (PD,T2, T1-GdDTPA): Lesion change assessment''' <small> (Data,Presets, Solution, zip file 17 MB) </small>]] | |
| − | * | + | *[[Media:RegLib_05_KneeMRI.zip|'''Registration Library Case 05: Knee MRI inter-subject'''<small> (Data,Presets,Tutorial, Solution, zip file 10 MB) </small>]] |
| − | * | + | <!-- |
| − | * | + | commented out until data sharing is resolved: Feb.26 2010: |
| + | *[[Media:RegLib_C06_BreastCancer_Data.zip|'''Registration Library Case 06: Breast Cancer MRI, treatment evaluation''' <small> (Data,Presets, Solution, zip file 85 MB) </small>]]''' | ||
| + | --> | ||
| + | *[[Media:RegLib_C08_WholeBody_PET-CT.zip|'''Registration Library Case 08: Whole Body PET-CT intra subject'''<small> (Data,Presets,Tutorial, Solution, zip file 135 MB) </small>]] | ||
| + | *[[Media:RegLib_09_fMRI_full.zip|'''Registration Library Case 09: fMRI to structural reference''' <small> (Data,Presets,Tutorial, Solution, zip file 39 MB) </small>]] | ||
| + | *[[Media: RegLib_C10_MRI_AtlasSegmentation_Data.zip|'''Registration Library Case 10: Probabilistic atlas to subject'''<small> (Data,Tutorial, Solution, zip file 14 MB) </small>]] | ||
| + | *[[Media:RegLib_C11_AtlasMerge_TutorialSet.zip|'''Registration Library Case 11: MRI brain atlas to atlas for label merging'''<small> (Original Data, Intermediate Results, Solution, zip file 72 MB) </small>]] | ||
**[[Media:RegLib_C11_AtlasMerge_OldAtlas.zip|Registration Library Case 11: old atlas dataset <small> (MRI+labelmap,thalamic nuclei models, list of labels+names), zip file 35 MB) </small>]] | **[[Media:RegLib_C11_AtlasMerge_OldAtlas.zip|Registration Library Case 11: old atlas dataset <small> (MRI+labelmap,thalamic nuclei models, list of labels+names), zip file 35 MB) </small>]] | ||
**[[Media:RegLib_C11_AtlasMerge_NewAtlas.zip|Registration Library Case 11: new atlas dataset <small> (MRI+labelmap, thalamus model), zip file 66 MB) </small>]] | **[[Media:RegLib_C11_AtlasMerge_NewAtlas.zip|Registration Library Case 11: new atlas dataset <small> (MRI+labelmap, thalamus model), zip file 66 MB) </small>]] | ||
**[[Media:RegLib_C11_AtlasMerge_NewAtlasMerged.zip|Registration Library Case 11: result new merged atlas dataset <small> (grayscale, new labelmap incl. thalamic nuclei, result transform mapping old to new, text (csv) file with label names & numbers'), zip file 66 MB) </small>]] | **[[Media:RegLib_C11_AtlasMerge_NewAtlasMerged.zip|Registration Library Case 11: result new merged atlas dataset <small> (grayscale, new labelmap incl. thalamic nuclei, result transform mapping old to new, text (csv) file with label names & numbers'), zip file 66 MB) </small>]] | ||
**[[Media:RegLib_C11_Tutorial_AtlasMerging.ppt.zip|Registration Library Case 11: full step-by-step tutorial<small> (PowerPoint, zip file, 2.5 MB) </small>]] | **[[Media:RegLib_C11_Tutorial_AtlasMerging.ppt.zip|Registration Library Case 11: full step-by-step tutorial<small> (PowerPoint, zip file, 2.5 MB) </small>]] | ||
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Latest revision as of 22:05, 26 February 2010
Home < Projects:RegistrationDocumentation:RegLibDataListBack to ARRA main page, Registration main page
Below is a list of all the currently downloadable Registration Case Library files. This list is under active development and is expected to grow and change (Feb. 2010 to Oct. 2011). For a detailed description of each case please visit the Library Main Page. Files are zip archives containing images in NRRD format, Slicer3 scene files and presets and guided tutorials in PowerPoint or Movie format. You can also find these files mirrored on the MIDAS database
- Registration Library Case 01: Brain Tumor Growth (full package, zip file 34 MB)
- Registration Library Case 01: registration parameter presets file (MRML file, import as scene)
- Registration Library Case 01: image dataset only (NRRD, 11 MB, filename: RegLib_C01_Data_TumorGrowth.zip)
- Registration Library Case 01: image dataset only (NRRD, 11 MB, filename: RegLib_Case_01_NRRD_TumorGrowth.zip)
- Registration Library Case 01: image dataset in NIFTI format (NIFTI / nii, 11 MB, filename: RegLib_C01_DataNIFTI_TumorGrowth.zip)
- Registration Library Case 01: result transform file (ITK .tfm file, load into slicer and apply to the target volume)
- Registration Library Case 01:/play video tutorial (quicktime, 16 MB, filename: RegLib_C01_VideoTutorial_TumorGrowth.mov)
- Registration Library Case 01: power point tutorial (zip file, 3 MB, filename: RegLib_C01_PPTTutorial_TumorGrowth.ppt.zip)
- Registration Library Case 01: step-by step text instructions (rtf text file)
- Registration Library Case 01: Multiresolution testresult package (Data,Xform, Solution, zip file 17 MB)
- Registration Library Case 02: MSBrain intra-subject multi-contrast: FLAIR+lesion segmentation to SPGR + mask (Data,Presets, Solution, zip file 27 MB)
- Registration Library Case 03: DTI to baseline (Data,Presets,Tutorial, Solution, zip file 24 MB)
- Registration Library Case 04: MS Multi-contrast series (PD,T2, T1-GdDTPA): Lesion change assessment (Data,Presets, Solution, zip file 17 MB)
- Registration Library Case 05: Knee MRI inter-subject (Data,Presets,Tutorial, Solution, zip file 10 MB)
- Registration Library Case 08: Whole Body PET-CT intra subject (Data,Presets,Tutorial, Solution, zip file 135 MB)
- Registration Library Case 09: fMRI to structural reference (Data,Presets,Tutorial, Solution, zip file 39 MB)
- Registration Library Case 10: Probabilistic atlas to subject (Data,Tutorial, Solution, zip file 14 MB)
- Registration Library Case 11: MRI brain atlas to atlas for label merging (Original Data, Intermediate Results, Solution, zip file 72 MB)
- Registration Library Case 11: old atlas dataset (MRI+labelmap,thalamic nuclei models, list of labels+names), zip file 35 MB)
- Registration Library Case 11: new atlas dataset (MRI+labelmap, thalamus model), zip file 66 MB)
- Registration Library Case 11: result new merged atlas dataset (grayscale, new labelmap incl. thalamic nuclei, result transform mapping old to new, text (csv) file with label names & numbers'), zip file 66 MB)
- Registration Library Case 11: full step-by-step tutorial (PowerPoint, zip file, 2.5 MB)
