Difference between revisions of "Projects:RegistrationLibrary:RegLib C16"
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[[Projects:RegistrationDocumentation:UseCaseInventory|Back to Registration Use-case Inventory]] <br> | [[Projects:RegistrationDocumentation:UseCaseInventory|Back to Registration Use-case Inventory]] <br> | ||
| − | ==Slicer Registration Library Case #16: Manual alignment of intra-subject Brain MRI == | + | ==<small>v3.6.1</small> [[Image:Slicer3-6Announcement-v1.png|150px]] Slicer Registration Library Case #16: Manual alignment of intra-subject Brain MRI== |
| − | {| style="color:#bbbbbb | + | === Input === |
| + | {| style="color:#bbbbbb; " cellpadding="10" cellspacing="0" border="0" | ||
|[[Image:RegLib_C16_Brain0.png|200px|lleft|this is the fixed reference image. All images are aligned into this space]] | |[[Image:RegLib_C16_Brain0.png|200px|lleft|this is the fixed reference image. All images are aligned into this space]] | ||
| − | |[[Image: | + | |[[Image:RegArrow_Affine.png|100px|lleft]] |
|[[Image:RegLib_C16_Brain1.png|200px|lleft|this is the moving image. The transform is calculated by matching this to the reference image]] | |[[Image:RegLib_C16_Brain1.png|200px|lleft|this is the moving image. The transform is calculated by matching this to the reference image]] | ||
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| − | | | + | |fixed image/target |
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| − | | | + | |moving image |
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| + | *fixed: 1mm isotropic;256 x 256 x 146 | ||
| + | *moving: 1.2mm isotropic; 256 x 256 x 116 | ||
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| + | === Modules === | ||
| + | *[https://www.slicer.org/wiki/Modules:Transforms-Documentation-3.6 '''Transforms''' module] | ||
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===Objective / Background === | ===Objective / Background === | ||
| − | This is | + | This is an example illustrating the use of the manual registration tools. |
=== Keywords === | === Keywords === | ||
MRI, brain, head, intra-subject, FLAIR, T1, defacing | MRI, brain, head, intra-subject, FLAIR, T1, defacing | ||
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=== Registration Results=== | === Registration Results=== | ||
{| style="color:#bbbbbb; background-color:#333333;" cellpadding="10" cellspacing="0" border="0" | {| style="color:#bbbbbb; background-color:#333333;" cellpadding="10" cellspacing="0" border="0" | ||
| − | |[[Image:RegLib_C16_NoReg.gif|left|original unregistered]] | + | |[[Image:RegLib_C16_NoReg.gif|left|500px|original unregistered]] |
| − | |[[Image:RegLib_C16_Reg.gif|left|after manual alignment]] | + | |- |
| + | |[[Image:RegLib_C16_Reg.gif|left|500px|after manual alignment]] | ||
|} | |} | ||
===Download === | ===Download === | ||
| − | *'''[[Media: | + | *'''[[Media:RegLib_C16_ManualRegBrain.zip|download entire package <small> (Data+Tutorial, zip file 18 MB) </small>]]''' |
| − | + | *[[Media:RegLib_C16_ManualRegBrain_Data.zip|download image dataset only <small>(zip file, 15 MB) </small>]] | |
| − | + | *[[Media:RegLib_C16_Tutorial_ManualRegistration.ppt|download power point tutorial <small>(PowerPoint file, 3 MB) </small>]] | |
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Latest revision as of 18:07, 10 July 2017
Home < Projects:RegistrationLibrary:RegLib C16Back to ARRA main page
Back to Registration main page
Back to Registration Use-case Inventory
Contents
v3.6.1 
Slicer Registration Library Case #16: Manual alignment of intra-subject Brain MRI
Input
|
|
|
| fixed image/target | moving image |
- fixed: 1mm isotropic;256 x 256 x 146
- moving: 1.2mm isotropic; 256 x 256 x 116
Modules
Objective / Background
This is an example illustrating the use of the manual registration tools.
Keywords
MRI, brain, head, intra-subject, FLAIR, T1, defacing
Registration Results
 |
 |
Download
- download entire package (Data+Tutorial, zip file 18 MB)
- download image dataset only (zip file, 15 MB)
- download power point tutorial (PowerPoint file, 3 MB)
