Difference between revisions of "2011 Summer Project Week Breakout Session:DiffusionMRI"
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*Summarize Diffusion Support in Slicer3/4 | *Summarize Diffusion Support in Slicer3/4 | ||
*Plans for pre-packaged functionality in Slicer4 | *Plans for pre-packaged functionality in Slicer4 | ||
| − | *Support for file formats | + | *Support for file formats(Nrrd, Nifti, fiber file formats) |
*Current extensions | *Current extensions | ||
*Available datasets/atlases | *Available datasets/atlases | ||
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Diffusion projects in this meeting | Diffusion projects in this meeting | ||
| + | #[[2011_Summer_Project_Week_WMGeometry_Slicer4 | White matter geometry measures in Slicer 4]] (Peter Savadjiev) | ||
| + | #[[2011_Summer_Project_Week_re-parameterize_fiber|Re-parametrize fiber tracts for fiber statistics analysis]] (Yundi Shi, Clement Vachet, Benjamin Yvernault, Anuja Sharma, Martin Styner) | ||
| + | #[[2011_Summer_Project_Week_ODF_though_Fiber_Counting | ODF computation through fiber counting]] (Yinpeng Li, Ipek Oguz, Martin Styner) | ||
| + | #[[2011_Summer_Project_Week_Nifti_Support_for_Diffusion_Tensor_Images|Nifti Support for Diffusion Tensor Images]] (Demian) | ||
| + | #[[2011_Summer_Project_Week_Finishing_details_on_the_workflows_DICOM_full_brain_tractography_peritumoral|Finishing details on the workflows: DICOM->Full brain tractography / peritumoral]] (Demian) | ||
| + | #[[Summer_project_week_2011_Finsler_Streamlines|Adding streamlined tractography to the Finsler front propagation tractography toolkit]] (Antonio Tristán-Vega) | ||
| + | #[[2011_Summer_Project_Week_Slicer4_Tractography_Interaction_and_Display|Tractography Bundle/Cluster Interaction and Display in Slicer4]] (Lauren O'Donnell, Isaiah, Demian) | ||
| + | #[[2011_Summer_Project_Week_DTI_Volumetric_Tractography | DTI Volumetric Tractography]] (Steve Callahan, Mark Scully, Jim Miller) | ||
| + | #[[2011_Summer_Project_Week_DWI_Atlas | Slicer module for building an average population DWI Atlas]] (Ryan Eckbo, Sylvain Bouix) | ||
| + | #[[2011_Summer_Project_Week_DTI_Volumetric_Segmentation_for_Group_studies | DTI Volumetric Segmentation for Group studies]] (Gopal Veni, Ross Whitaker) | ||
Latest revision as of 15:04, 23 June 2011
Home < 2011 Summer Project Week Breakout Session:DiffusionMRIBack to 2011_Summer_Project_Week#Agenda
Agenda:
- Summarize Diffusion Support in Slicer3/4
- Plans for pre-packaged functionality in Slicer4
- Support for file formats(Nrrd, Nifti, fiber file formats)
- Current extensions
- Available datasets/atlases
- Desired/planned functionality
Diffusion projects in this meeting
- White matter geometry measures in Slicer 4 (Peter Savadjiev)
- Re-parametrize fiber tracts for fiber statistics analysis (Yundi Shi, Clement Vachet, Benjamin Yvernault, Anuja Sharma, Martin Styner)
- ODF computation through fiber counting (Yinpeng Li, Ipek Oguz, Martin Styner)
- Nifti Support for Diffusion Tensor Images (Demian)
- Finishing details on the workflows: DICOM->Full brain tractography / peritumoral (Demian)
- Adding streamlined tractography to the Finsler front propagation tractography toolkit (Antonio Tristán-Vega)
- Tractography Bundle/Cluster Interaction and Display in Slicer4 (Lauren O'Donnell, Isaiah, Demian)
- DTI Volumetric Tractography (Steve Callahan, Mark Scully, Jim Miller)
- Slicer module for building an average population DWI Atlas (Ryan Eckbo, Sylvain Bouix)
- DTI Volumetric Segmentation for Group studies (Gopal Veni, Ross Whitaker)
