Difference between revisions of "2012 Progress Report Science Wiki Version"
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+ | Back to [[NAMIC_Annual_Reports|NAMIC_Annual_Reports]]<br> | ||
+ | Back to [[2012_Progress_Report|NAMIC_2012_Progress_Report]]<br> | ||
+ | |||
This is where the outline for the 2012 scientific report for NA-MIC goes in. Ann will provide this outline by 4/1. | This is where the outline for the 2012 scientific report for NA-MIC goes in. Ann will provide this outline by 4/1. | ||
=Assignments: Short version= | =Assignments: Short version= | ||
− | + | Reporting Interval: 7/1/2011- 6/30/2012 | |
{| class="wikitable sortable labelpage labelpagetable" border="1" width="100%" cellpadding="5" | {| class="wikitable sortable labelpage labelpagetable" border="1" width="100%" cellpadding="5" | ||
|- style="background:#c2c2c2; color:black" align="left" | |- style="background:#c2c2c2; color:black" align="left" | ||
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| style="background:#ffffdd; color:black" align="center"|1. INTRODUCTION | | style="background:#ffffdd; color:black" align="center"|1. INTRODUCTION | ||
− | | style="background:#c4f4af; color:black"| | + | | style="background:#c4f4af; color:black"|Ron |
− | | style="background:#fff6a6; color:black"|Update Figure 1-1. Geo-anatomical Map of NA-MIC Collaborations | + | | style="background:#fff6a6; color:black"|Update Figure 1-1. Geo-anatomical Map of NA-MIC Collaborations, Recent changes and Center (administrative) highlights |
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|2. HIGHLIGHTS | + | | style="background:#ffffdd; color:black" align="center"|2. [[2012_Progress_Report_HIGHLIGHTS | HIGHLIGHTS]] |
− | | style="background:#c4f4af; color:black"| | + | | style="background:#c4f4af; color:black"|Will Schroeder, Kitware |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|2.1 Algorithms, 2.2 Engineering, 2.3 NA-MIC Kit. |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/23/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|3. IMPACT AND VALUE TO BIOCOMPUTING | + | | style="background:#ffffdd; color:black" align="center"|3. [[2012_Progress_Report_IMPACT | IMPACT AND VALUE TO BIOCOMPUTING]] |
− | | style="background:#c4f4af; color:black"|Jim Miller | + | | style="background:#c4f4af; color:black"|Jim Miller, GE |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|3.1 Impact within the Center, 3.2 Impact within NIH-Funded Research, 3.3 National and International Impact |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|4. DRIVING BIOLOGICAL PROJECTS | + | | style="background:#ffffdd; color:black" align="center"|4. RESEARCH PROGRESS SUMMARIES |
+ | | style="background:#c4f4af; color:black"| | ||
+ | | style="background:#fff6a6; color:black"| | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"|4.1 DRIVING BIOLOGICAL PROJECTS | ||
| style="background:#c4f4af; color:black"|DBP PIs | | style="background:#c4f4af; color:black"|DBP PIs | ||
| style="background:#fff6a6; color:black"| | | style="background:#fff6a6; color:black"| | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|4.1 Atrial Fibrillation | + | | style="background:#ffffdd; color:black" align="center"|4.1.1 [[2012_Progress_Report_DBP Atrial_Fibrillation | Atrial Fibrillation]] |
− | | style="background:#c4f4af; color:black"|Rob MacLeod | + | | style="background:#c4f4af; color:black"|Rob MacLeod, Utah |
− | | style="background:# | + | | style="background:#b4ebd4; color:black"|A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|4.2 Huntington's Disease | + | | style="background:#ffffdd; color:black" align="center"|4.1.2 [[2012_Progress_Report_DBP Huntington's Disease | Huntington's Disease]] |
− | | style="background:#c4f4af; color:black"|Hans Johnson | + | | style="background:#c4f4af; color:black"|Hans Johnson, Iowa |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/18/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|4.3 Adaptive Radiotherapy for Head and Neck Cancer | + | | style="background:#ffffdd; color:black" align="center"|4.1.3 [[2012_Progress_Report_DBP Adaptive Radiotherapy | Adaptive Radiotherapy for Head and Neck Cancer]] |
− | | style="background:#c4f4af; color:black"|Gregory C. Sharp | + | | style="background:#c4f4af; color:black"|Gregory C. Sharp, MGH |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/17/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"|4.4 Traumatic Brain Injury | + | | style="background:#ffffdd; color:black" align="center"|4.1.4 [[2012_Progress_Report_DBP_TBI | Traumatic Brain Injury]] |
− | | style="background:#c4f4af; color:black"|Jack Van Horn | + | | style="background:#c4f4af; color:black"|Jack Van Horn, UCLA |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/2/2012 | ||
|- | |- | ||
| style="background:#ffffdd; color:black" align="center"|5. COMPUTER SCIENCE CORE | | style="background:#ffffdd; color:black" align="center"|5. COMPUTER SCIENCE CORE | ||
| style="background:#c4f4af; color:black"|Ross Whitaker | | style="background:#c4f4af; color:black"|Ross Whitaker | ||
− | | style="background:#fff6a6; color:black"|Brief | + | | style="background:#fff6a6; color:black"|Brief Introduction: Algorithms, Engineering, NA-MIC Kit<br> |
|- | |- | ||
| style="background:#ffffdd; color:black" align="center"|5.1 Algorithms | | style="background:#ffffdd; color:black" align="center"|5.1 Algorithms | ||
− | | style="background:#c4f4af; color:black"|Martin Styner, Polina Golland | + | | style="background:#c4f4af; color:black"|Polina Golland, Guido Gerig, Allen Tannenbaum, Martin Styner |
− | | style="background:#c4f4af; color:black"|5.1. | + | | style="background:#b4e4d4; color:black"|5.1.1 Statistical Models of Anatomy and Pathology, Polina Golland<br>A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012<br> |
− | | style="background:# | + | |- |
− | | style="background:# | + | | style="background:#ffffdd; color:black" align="center"| |
− | | style="background:# | + | | style="background:#c4f4af; color:black"| |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|5.1.2. Geometric Correspondence, Guido Gerig<br>A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC<br> |
− | | style="background:# | + | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012<br> |
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"| | ||
+ | | style="background:#c4f4af; color:black"| | ||
+ | | style="background:#b4e4d4; color:black"|5.1.3. User Interactive Segmentation, Allen Tannenbaum<br>A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012<br><br> | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"| | ||
+ | | style="background:#c4f4af; color:black"| | ||
+ | | style="background:#b4e4d4; color:black"|5.1.4. Longitudinal and Time Series Analysis, Martin Styner<br>A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012<br> | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"|5.2 | ||
+ | | style="background:#c4f4af; color:black"|Will Schroeder, Steven Aylward, Steve Pieper, Jim Miller | ||
+ | | style="background:#b4e4d4; color:black"|5.2.1. [[2012_Progress_Report_Science_Wiki_Version_Engineering | End-user Platform, Steve Pieper]] | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/2/2012 | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"| | ||
+ | | style="background:#c4f4af; color:black"| | ||
+ | | style="background:#b4e4d4; color:black" align="center"|5.2.2. [[2012_Progress_Report_Science_Wiki_Version_Engineering | Computational Platform, Jim Miller]] | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"| | + | |
− | | style="background:#c4f4af; color:black"| | + | | style="background:#ffffdd; color:black" align="center"| |
− | | style="background:# | + | | style="background:#c4f4af; color:black"| |
− | + | | style="background:#b4e4d4; color:black" align="center"|5.2.3. [[2012_Progress_Report_Science_Wiki_Version_Engineering | Data Management Platform, Dan Marcus]] | |
− | + | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012 | |
− | |||
− | | style="background:# | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"| | + | | style="background:#ffffdd; color:black" align="center"| |
| style="background:#c4f4af; color:black"| | | style="background:#c4f4af; color:black"| | ||
− | | style="background:# | + | | style="background:#b4e4d4; color:black" align="center"|5.2.4.[[2012_Progress_Report_Science_Wiki_Version_Engineering | Software Process, Stephen R. Aylward ]] |
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/20/2012 | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"|5.3 [[2012_Progress_Report_Science_Wiki_Version_Engineering | NA-MIC Kit]] | ||
+ | | style="background:#c4f4af; color:black"|Will Schroeder, Steven Aylward, Steve Pieper, Jim Miller | ||
+ | | style="background:#b4e4d4; color:black"|5.3.1. [[2012_Progress_Report_Science_Wiki_Version_Engineering | Expansion<br>5.3.2. Release<br>]] | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/21/2012 | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"|6. [[2012_Progress_Report_ARRA_Supplement| ARRA SUPPLEMENT]] | ||
+ | | style="background:#c4f4af; color:black"|Steve Aylward | ||
+ | | style="background:#b4e4d4; color:black"|6.1 Summary of Funded Activity | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/2/2012 | ||
+ | |- | ||
+ | | style="background:#ffffdd; color:black" align="center"|7. [[2012_Progress_Report_Outreach| OUTREACH]] | ||
+ | | style="background:#c4f4af; color:black"|Sonia Pujol | ||
+ | | style="background:#b4e4d4; color:black"|7.1 Summary of Outreach Activities<br> | ||
+ | | style="background:#b4e4d4; color:black"|Submitted on 4/13/2012 | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"| | + | | style="background:#ffffdd; color:black" align="center"|8. NA-MIC PUBLICATIONS |
| style="background:#c4f4af; color:black"|Marianna | | style="background:#c4f4af; color:black"|Marianna | ||
− | | style="background:#fff6a6; color:black"| | + | | style="background:#fff6a6; color:black"|8.1 Papers that Acknowledge NA-MIC, 8.2. Conference Reports [[2012_Progress_Report#Dissemination|Go to All Papers List]] |
+ | | | ||
|- | |- | ||
− | | style="background:#ffffdd; color:black" align="center"| | + | | style="background:#ffffdd; color:black" align="center"|9. External Advisory Board (EAB) Report |
| style="background:#c4f4af; color:black"|Bill Lorensen | | style="background:#c4f4af; color:black"|Bill Lorensen | ||
| style="background:#fff6a6; color:black"| | | style="background:#fff6a6; color:black"| | ||
+ | | | ||
+ | |} |
Latest revision as of 19:49, 11 April 2023
Home < 2012 Progress Report Science Wiki VersionBack to NAMIC_Annual_Reports
Back to NAMIC_2012_Progress_Report
This is where the outline for the 2012 scientific report for NA-MIC goes in. Ann will provide this outline by 4/1.
Assignments: Short version
Reporting Interval: 7/1/2011- 6/30/2012
Task | Owner | Title, comments | |
1. INTRODUCTION | Ron | Update Figure 1-1. Geo-anatomical Map of NA-MIC Collaborations, Recent changes and Center (administrative) highlights | |
2. HIGHLIGHTS | Will Schroeder, Kitware | 2.1 Algorithms, 2.2 Engineering, 2.3 NA-MIC Kit. | Submitted on 4/23/2012 |
3. IMPACT AND VALUE TO BIOCOMPUTING | Jim Miller, GE | 3.1 Impact within the Center, 3.2 Impact within NIH-Funded Research, 3.3 National and International Impact | Submitted on 4/20/2012 |
4. RESEARCH PROGRESS SUMMARIES | |||
4.1 DRIVING BIOLOGICAL PROJECTS | DBP PIs | ||
4.1.1 Atrial Fibrillation | Rob MacLeod, Utah | A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | Submitted on 4/20/2012 |
4.1.2 Huntington's Disease | Hans Johnson, Iowa | A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | Submitted on 4/18/2012 |
4.1.3 Adaptive Radiotherapy for Head and Neck Cancer | Gregory C. Sharp, MGH | A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | Submitted on 4/17/2012 |
4.1.4 Traumatic Brain Injury | Jack Van Horn, UCLA | A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC | Submitted on 4/2/2012 |
5. COMPUTER SCIENCE CORE | Ross Whitaker | Brief Introduction: Algorithms, Engineering, NA-MIC Kit | |
5.1 Algorithms | Polina Golland, Guido Gerig, Allen Tannenbaum, Martin Styner | 5.1.1 Statistical Models of Anatomy and Pathology, Polina Golland A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
Submitted on 4/20/2012 |
5.1.2. Geometric Correspondence, Guido Gerig A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
Submitted on 4/20/2012 | ||
5.1.3. User Interactive Segmentation, Allen Tannenbaum A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
Submitted on 4/20/2012 | ||
5.1.4. Longitudinal and Time Series Analysis, Martin Styner A. Introduction, B. Research Progress Report, C. Plans for the Coming Year, D. Papers that Acknowledge NA-MIC |
Submitted on 4/20/2012 | ||
5.2 | Will Schroeder, Steven Aylward, Steve Pieper, Jim Miller | 5.2.1. End-user Platform, Steve Pieper | Submitted on 4/2/2012 |
5.2.2. Computational Platform, Jim Miller | Submitted on 4/20/2012 | ||
5.2.3. Data Management Platform, Dan Marcus | Submitted on 4/20/2012 | ||
5.2.4. Software Process, Stephen R. Aylward | Submitted on 4/20/2012 | ||
5.3 NA-MIC Kit | Will Schroeder, Steven Aylward, Steve Pieper, Jim Miller | 5.3.1. Expansion 5.3.2. Release |
Submitted on 4/21/2012 |
6. ARRA SUPPLEMENT | Steve Aylward | 6.1 Summary of Funded Activity | Submitted on 4/2/2012 |
7. OUTREACH | Sonia Pujol | 7.1 Summary of Outreach Activities |
Submitted on 4/13/2012 |
8. NA-MIC PUBLICATIONS | Marianna | 8.1 Papers that Acknowledge NA-MIC, 8.2. Conference Reports Go to All Papers List | |
9. External Advisory Board (EAB) Report | Bill Lorensen |