Difference between revisions of "2014 Summer Project Week:UpdateBRAINSTools"
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Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | ||
| − | Image: | + | Image:SlicerDWIConvert.png|[[GUI|Slicer GUI]] |
</gallery> | </gallery> | ||
| Line 9: | Line 9: | ||
* Kitware: JC | * Kitware: JC | ||
* NLM: Brad | * NLM: Brad | ||
| + | * Various NAMIC team members | ||
==Project Description== | ==Project Description== | ||
| Line 14: | Line 15: | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | * Update Slicer build to include BRAINSTools | + | * Update Slicer build to include BRAINSTools based on ITKv4 registration framework |
* Ensure all BRAINSTools regression tests pass in the Slicer environment | * Ensure all BRAINSTools regression tests pass in the Slicer environment | ||
| − | * Test ITK thread pool | + | * Test ITK thread pool implementation in Slicer build |
* ITKv4 registation in SimpleITK | * ITKv4 registation in SimpleITK | ||
| Line 22: | Line 23: | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | * | + | * Write Tests, Write Code, Drink Coffee, Sleep (Optional) |
| + | * Repeat | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * Create new GUI layout for DWIConvert based on user feedback (Thanks Sonia!) |
| + | * Successfully update nightly BRAINSTools in Slicer | ||
| + | ** Now using the ITKv4 registration framework | ||
| + | ** Update Slicer to ITK release candidate. | ||
| + | *Convert Toews Feat | ||
| + | ** Put it in github | ||
| + | ** Convert image IO to ITK | ||
| + | ** Convert Transform formats to ITK compliant | ||
| + | ** Convert command line interface to SlicerExecutionModel | ||
| + | ** Compliant with ITK Image and ITK Transform file interfaces. | ||
</div> | </div> | ||
</div> | </div> | ||
Latest revision as of 13:09, 27 June 2014
Home < 2014 Summer Project Week:UpdateBRAINSTools
Key Investigators
- IOWA: Hans, Dave, Kent
- Kitware: JC
- NLM: Brad
- Various NAMIC team members
Project Description
Objective
- Update Slicer build to include BRAINSTools based on ITKv4 registration framework
- Ensure all BRAINSTools regression tests pass in the Slicer environment
- Test ITK thread pool implementation in Slicer build
- ITKv4 registation in SimpleITK
Approach, Plan
- Write Tests, Write Code, Drink Coffee, Sleep (Optional)
- Repeat
Progress
- Create new GUI layout for DWIConvert based on user feedback (Thanks Sonia!)
- Successfully update nightly BRAINSTools in Slicer
- Now using the ITKv4 registration framework
- Update Slicer to ITK release candidate.
- Convert Toews Feat
- Put it in github
- Convert image IO to ITK
- Convert Transform formats to ITK compliant
- Convert command line interface to SlicerExecutionModel
- Compliant with ITK Image and ITK Transform file interfaces.
