2014 Summer Project Week:UpdateBRAINSTools

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  Projects List

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  Slicer GUI

Key Investigators

• IOWA: Hans, Dave, Kent
• Kitware: JC
• NLM: Brad
• Various NAMIC team members

Project Description

Objective

• Update Slicer build to include BRAINSTools based on ITKv4 registration framework
• Ensure all BRAINSTools regression tests pass in the Slicer environment
• Test ITK thread pool implementation in Slicer build
• ITKv4 registation in SimpleITK

Approach, Plan

• Write Tests, Write Code, Drink Coffee, Sleep (Optional)
• Repeat

Progress

• Create new GUI layout for DWIConvert based on user feedback (Thanks Sonia!)
• Successfully update nightly BRAINSTools in Slicer
  • Now using the ITKv4 registration framework
  • Update Slicer to ITK release candidate.
• Convert Toews Feat
  • Put it in github
  • Convert image IO to ITK
  • Convert Transform formats to ITK compliant
  • Convert command line interface to SlicerExecutionModel
  • Compliant with ITK Image and ITK Transform file interfaces.