Difference between revisions of "2017 Winter Project Week/PyRadiomics"
From NAMIC Wiki
| (2 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
Image:RadiomicsWorkflow.jpg | Image:RadiomicsWorkflow.jpg | ||
Image:PyRadiomics_structure.jpg | Image:PyRadiomics_structure.jpg | ||
| + | Image:SlicerRadiomics.jpg | ||
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --> | <!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --> | ||
| Line 35: | Line 36: | ||
* There are still some issues with the packaging of the extension, SlicerRadiomics. Numpy issue is resolved, PyRadiomics works with numpy 1.9.2, adjusted minimum requirements. Once these issues are resolved, it will be made publicly available in the [http://github.com/Radiomics Github Radiomics Organisation]. | * There are still some issues with the packaging of the extension, SlicerRadiomics. Numpy issue is resolved, PyRadiomics works with numpy 1.9.2, adjusted minimum requirements. Once these issues are resolved, it will be made publicly available in the [http://github.com/Radiomics Github Radiomics Organisation]. | ||
* C code performance enhancement is written, but is still causing some issues during compilation. Switch setup to use skbuild and cmake. Latest (offline) tests work with setup.py develop and setup.py test. | * C code performance enhancement is written, but is still causing some issues during compilation. Switch setup to use skbuild and cmake. Latest (offline) tests work with setup.py develop and setup.py test. | ||
| + | * Issues related to building SlicerRadiomics have been fixed, extension can now be built and used in the built version in the basic form | ||
| + | * Issues related to packaging SlicerRadiomics have been identified (limitations of Slicer infrastructure packaging external python packages); JC identified the solution approach, and the issue will be resolved soon, we expect the extension to be available publicly within a month | ||
|} | |} | ||
| Line 41: | Line 44: | ||
* [https://Github.com/Radiomics/pyradiomics GitHub Repository] | * [https://Github.com/Radiomics/pyradiomics GitHub Repository] | ||
* [http://pyradiomics.readthedocs.io Documentation] | * [http://pyradiomics.readthedocs.io Documentation] | ||
| + | * https://Github.com/Radiomics/SlicerRadiomics | ||
Latest revision as of 16:30, 13 January 2017
Home < 2017 Winter Project Week < PyRadiomics
Key Investigators
- Joost van Griethuysen
- Hugo Aerts
- Steve Pieper
- Jean-Christophe Fillion-Robin
- Andrey Fedorov
Project Description
| Objective | Approach and Plan | Progress and Next Steps |
|---|---|---|
|
|
|
