Difference between revisions of "NA"

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'''Objective:''' We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.
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'''Objective:''' To develop a easily applicable LONI pipeline module for performing the UNC shape analysis on structural segmentation data.
  
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'''Progress:''' Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version has been submitted.
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'''Progress:''' An initial working module has been developed and tested on a caudate shape analysis study. Currently the fine details of the pipeline are being optimized.
  
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''References:''
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<div class="thumb tright"><div style="width: 402px">[[Image:UNCShapeInLONIpipeline.gif|[[Image:400px-UNCShapeInLONIpipeline.gif]]]]<div class="thumbcaption"><div class="magnify" style="float: right">[[Image:UNCShapeInLONIpipeline.gif|[[Image:magnify-clip.png|Enlarge]]]]</div></div></div></div>
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* Corouge, I., Fletcher, T., Joshi, S., Gilmore J.H., and Gerig, G., Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis, Lecture Notes in Computer Science LNCS, James S. Duncan and Guido Gerig, editors, Springer Verlag, Vol. 3749, Oct. 2005, pp. 131 -- 138
 
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* C. Goodlett, I. Corouge, M. Jomier, and G. Gerig, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .
 
  
 
'''Key Investigators:'''
 
'''Key Investigators:'''
  
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* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig
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* UNC: Martin Styner, Ipek Oguz
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* Utah: Tom Fletcher, Ross Whitaker
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* LONI: Michael Pan, Jagadeeswaran Rajendiran
  
 
'''Links:'''
 
'''Links:'''
  
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* [[Progress_Report:Diffusion_Tensor_Statistics|Diffusion Tensor Statistics Progress Report]]
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* [[NAMIC_Wiki:Community_ShapeAnalysis|Shape Analysis page]]
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* [[Progress_Report:Shape_Analysis|UNC Shape Analysis Progress Report]]
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* [[AHM_2006:ProjectsUNCLoniShap|Project Week 06 Page for LONI pipeline with UNC shape analysis]]
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* [[Engineering:Project:2006_AHM_Programming:MeshVisu|Project Week 06 Page for UNC visualization tool]]
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* [[LONIPipelineSummary|Loni pipeline summary]]

Revision as of 13:28, 18 December 2006

Home < NA

Objective: To develop a easily applicable LONI pipeline module for performing the UNC shape analysis on structural segmentation data.

Progress: An initial working module has been developed and tested on a caudate shape analysis study. Currently the fine details of the pipeline are being optimized.

File:400px-UNCShapeInLONIpipeline.gif
Enlarge

Key Investigators:

  • UNC: Martin Styner, Ipek Oguz
  • LONI: Michael Pan, Jagadeeswaran Rajendiran

Links:

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