Difference between revisions of "DBP:Harvard:Software:Minutes:11"
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# [[DBP:Harvard:Software:Testing:DTI:Slicer|Software Testing]], DTMRI module | # [[DBP:Harvard:Software:Testing:DTI:Slicer|Software Testing]], DTMRI module | ||
| − | #* Any updates for NRRD headers/caseD20? | + | #* Any updates for NRRD headers/caseD20? (Raul) |
| + | #* Gordon: NRRD headers for recent EPI scan? | ||
| + | #** Want to show images (from emails)? | ||
| + | #** Also, want to discuss new scan parameters mentioned over emails? | ||
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum|Corpus Callosum Diffusion Measures]] | # [[DBP:Harvard:Software:Bugs:Corpus_Callosum|Corpus Callosum Diffusion Measures]] | ||
| + | #* We are currently examining differences between old/new labelmaps, etc. | ||
| + | #* It does not appear to be a DICOM issue, but we will check. | ||
| + | #* More details on this next week. | ||
# [[DBP:Harvard:Software:Bugs:Corpus_Callosum_Fibers|Smoothing of Corpus Callosum Fibers ]] | # [[DBP:Harvard:Software:Bugs:Corpus_Callosum_Fibers|Smoothing of Corpus Callosum Fibers ]] | ||
| + | #* Has anyone met about smoothing? | ||
# Lauren: Fiber clustering, backtracking to corpus labelmap? | # Lauren: Fiber clustering, backtracking to corpus labelmap? | ||
| − | # | + | #* Appears to be available in Slicer, so we need to test it on a few cases. |
| + | #** Would it be better to test clustering on smoothed data? | ||
| + | #* Limiting factor appears to be speed of clustering. | ||
| + | # Cingulum Bundle Fiber Tracking | ||
| + | #* See examples of labelmaps [[DBP:Harvard:Software:Bugs:2ROI|here]]. | ||
| + | #* We've been testing Raul's "2ROI" Module [[DBP:Harvard:Software:Bugs:Cingulum_Bundle_Fibers|here]]. | ||
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Revision as of 14:02, 18 December 2006
Home < DBP:Harvard:Software:Minutes:11Agenda for 11-9-05 Meeting
- Software Testing, DTMRI module
- Any updates for NRRD headers/caseD20? (Raul)
- Gordon: NRRD headers for recent EPI scan?
- Want to show images (from emails)?
- Also, want to discuss new scan parameters mentioned over emails?
- Corpus Callosum Diffusion Measures
- We are currently examining differences between old/new labelmaps, etc.
- It does not appear to be a DICOM issue, but we will check.
- More details on this next week.
- Smoothing of Corpus Callosum Fibers
- Has anyone met about smoothing?
- Lauren: Fiber clustering, backtracking to corpus labelmap?
- Appears to be available in Slicer, so we need to test it on a few cases.
- Would it be better to test clustering on smoothed data?
- Limiting factor appears to be speed of clustering.
- Appears to be available in Slicer, so we need to test it on a few cases.
- Cingulum Bundle Fiber Tracking
TO DO THIS WEEK
- FiberViewer testing: measure FA/trace along one fiber, and compare with Marc's Matlab scripts/output
- Mark & Sylvain, work on getting sagittal DTI onto NAMIC for UNC
