Difference between revisions of "Projects:RegistrationDocumentation:UseCaseInventory"

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== Source ==
 
== Source ==
 
Data is collected from a variety of sources. Because we want to focus on the registration problem and not be distracted by image format or other data management issues, the datasets listed here are copied and reformatted. As the data becomes available a download link is added. The final format for the data sharing mechanism is yet undecided, likely XNAT CENTRAL.  Where possible the link to the original source is provided.
 
Data is collected from a variety of sources. Because we want to focus on the registration problem and not be distracted by image format or other data management issues, the datasets listed here are copied and reformatted. As the data becomes available a download link is added. The final format for the data sharing mechanism is yet undecided, likely XNAT CENTRAL.  Where possible the link to the original source is provided.
*Links here also from the  [[Data|NA-MIC resource page]].
+
*Links here also from the  [[Data|NA-MIC resource page]].To be updated when moving.
  
 
==Formatting==
 
==Formatting==

Revision as of 21:00, 9 October 2009

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Source

Data is collected from a variety of sources. Because we want to focus on the registration problem and not be distracted by image format or other data management issues, the datasets listed here are copied and reformatted. As the data becomes available a download link is added. The final format for the data sharing mechanism is yet undecided, likely XNAT CENTRAL. Where possible the link to the original source is provided.

Formatting

We seek to have all datasets in a single-volume file format, most likely .nii or .nrrd
Once formatting, anonymization and description are complete, listing here will be replaced with a download link. Temporarily listed are links to source databases, where avail.

Case Inventory Brain

  • Intra-subject T1-T2-DTI
  • DTI baseline to T1 inter-subject with clipped FOV
  • Intra-subject PD,T2, T1Gd (MS)
  • Scan-rescan intra-subject. No change.

Case Inventory Non-Brain

Case Inventory Non-human

Self-validation Sets

These are datasets with artificial misalignment, i.e. the perfect alignment is known.

  • Dual Echo PD/T2 intra subject different contrast self validation
  • Isotropic Brain SPGR T1 with single axis rotation