Difference between revisions of "SDIWG:Meeting Minutes 20100219"
From NAMIC Wiki
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**[http://www.biositemaps.org Biositemaps] is a technology to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining biomedical resources. The underlying technology for Biositemaps is the [http://bioportal.bioontology.org/visualize/40656 Biomedical Resource Ontology (BRO) V2.7.1] and the [http://biositemaps.bioontology.org/editor/ Information Model (IM) which is encapsulated in the Biositemaps Editor. Please try it out.] | **[http://www.biositemaps.org Biositemaps] is a technology to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining biomedical resources. The underlying technology for Biositemaps is the [http://bioportal.bioontology.org/visualize/40656 Biomedical Resource Ontology (BRO) V2.7.1] and the [http://biositemaps.bioontology.org/editor/ Information Model (IM) which is encapsulated in the Biositemaps Editor. Please try it out.] | ||
*** ([http://www.loni.ucla.edu/~dinov Ivo Dinov]) [http://www.na-mic.org/Wiki/images/9/96/CCB_Supplement_Biositemaps_Pipeline_Report_2010.pdf Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability]. | *** ([http://www.loni.ucla.edu/~dinov Ivo Dinov]) [http://www.na-mic.org/Wiki/images/9/96/CCB_Supplement_Biositemaps_Pipeline_Report_2010.pdf Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability]. | ||
| − | **** [http://www.na-mic.org/Wiki/images/5/58/Biositemap_NCBC_CCB_PL_update021610.rdf.txt | + | **** CCB Biositemap.RDF |
| + | ***** [www.loni.ucla.edu/download/iTools/biositemap_NCBC_CCB.rdf Original (Standard RDF)] | ||
| + | ***** [http://www.na-mic.org/Wiki/images/5/58/Biositemap_NCBC_CCB_PL_update021610.rdf.txt Extended Biositemap_NCBC_CCB_PL_update021610.rdf] | ||
**** Example Pipeline workflows ([http://www.na-mic.org/Wiki/images/3/3b/ND_WaveletTransform_WAIR.pipe.txt ND_WaveletTransform_WAIR.pipe], [http://www.na-mic.org/Wiki/images/1/12/ShapeTransform.pipe.txt ShapeTransform.pipe], [http://www.na-mic.org/Wiki/images/d/db/ShapeDistance.pipe.txt ShapeDistance.pipe]). | **** Example Pipeline workflows ([http://www.na-mic.org/Wiki/images/3/3b/ND_WaveletTransform_WAIR.pipe.txt ND_WaveletTransform_WAIR.pipe], [http://www.na-mic.org/Wiki/images/1/12/ShapeTransform.pipe.txt ShapeTransform.pipe], [http://www.na-mic.org/Wiki/images/d/db/ShapeDistance.pipe.txt ShapeDistance.pipe]). | ||
**** [http://pipeline.loni.ucla.edu/support/xml-overview/ Pipeline XML Invocation Protocol]. | **** [http://pipeline.loni.ucla.edu/support/xml-overview/ Pipeline XML Invocation Protocol]. | ||
Revision as of 21:12, 16 February 2010
Home < SDIWG:Meeting Minutes 20100219Contents
NCBC Joint Working Group Meeting
Notes
Friday February 19, 2010: 2:30-3:30 PM EST
Please contact Peter Lyster for information Peter Lyster
SDIWG Meetings Page
Save the date for the next SDWIG tcon/Connect, three months from now: May 21, 2010
Tcon DRAFT Agenda
- Roll Call/Note-taker (Jags) (5 min)
- Minutes from the last SDIWG tcon November 20, 2009 (5 min)
- Status check on working groups:
- Biositemaps is a technology to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining biomedical resources. The underlying technology for Biositemaps is the Biomedical Resource Ontology (BRO) V2.7.1 and the Information Model (IM) which is encapsulated in the Biositemaps Editor. Please try it out.
- (Ivo Dinov) Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability.
- CCB Biositemap.RDF
- [www.loni.ucla.edu/download/iTools/biositemap_NCBC_CCB.rdf Original (Standard RDF)]
- Extended Biositemap_NCBC_CCB_PL_update021610.rdf
- Example Pipeline workflows (ND_WaveletTransform_WAIR.pipe, ShapeTransform.pipe, ShapeDistance.pipe).
- Pipeline XML Invocation Protocol.
- CCB Biositemap.RDF
- Plans for adoption within and beyond NCBCs: CTSA, NIF, NITRC,IMAG,...
- (Ivo Dinov) Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability.
- Scientific Ontologies
- NCBC Driving Biological Projects Interactions and Impact
- NCBC Dissemination and shared calendar: Dissemination page is at http://wiki.simtk.org/ncbcdisseminate/. The calendar is at http://www.ncbcs.org/cal.html with RSS feeds available for each center at http://www.ncbcs.org/summary-cal.html. Please check it out and provide feedback. (Joy)
- Biositemaps is a technology to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining biomedical resources. The underlying technology for Biositemaps is the Biomedical Resource Ontology (BRO) V2.7.1 and the Information Model (IM) which is encapsulated in the Biositemaps Editor. Please try it out.
Minutes
- Note taker: [Suggested order of note takers for future meetings: Jags (this one), Dinov (next one), Murphy, Ku, Schroeder, Floratos, Rubenson]
- Review of November 20, 2009 Minutes
- Attendees:
Item 1
Item 2
Item 3
etc
Action Items
- TBD
