Difference between revisions of "Projects:ARRA:SlicerEM:Developer:ExampleWorkflow"
From NAMIC Wiki
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Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1.png|Step1 - Define Task | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1.png|Step1 - Define Task | ||
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1b.png|Step1b - Define Task | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step1b.png|Step1b - Define Task | ||
| − | Image:Projects-ARRA-SlicerEM-Developer- | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step_SimpleMode.png|Step2 - Define input channels (Simple mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer- | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step2.png|Step2 - Define input channels (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step3.png|Step3 - Define anatomical tree | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step3.png|Step3 - Define anatomical tree (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step4.png|Step4 - Define atlas | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step4.png|Step4 - Define atlas (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step5.png|Step5 - Edit Registration parameters | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step5.png|Step5 - Edit Registration parameters (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step6.png|Step6 - Define preprocessing | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step6.png|Step6 - Define preprocessing (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step8.png|Step7 - Specify Intensity Distribution | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step8.png|Step7 - Specify Intensity Distribution (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment step8b ClassDistributionGraph.png|Step7b - Plot class Distribution | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment step8b ClassDistributionGraph.png|Step7b - Plot class Distribution (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step9.png|Step8 - Edit node-based parameters | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step9.png|Step8 - Edit node-based parameters (Advanced mode) |
| − | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10.png|Step9 - Run Segmentation | + | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10.png|Step9 - Run Segmentation (Advanced mode) |
Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10_3DView.png|Step9 (3DView) | Image:Projects-ARRA-SlicerEM-Developer-EMSegment_step10_3DView.png|Step9 (3DView) | ||
</gallery> | </gallery> | ||
Revision as of 18:41, 3 August 2010
Home < Projects:ARRA:SlicerEM:Developer:ExampleWorkflowBack to SlicerEM:Developer page
- MRI Human brain workflow
Step1 - Define Task
Step1b - Define Task
Step2 - Define input channels (Simple mode)
Step2 - Define input channels (Advanced mode)
Step3 - Define anatomical tree (Advanced mode)
Step4 - Define atlas (Advanced mode)
Step5 - Edit Registration parameters (Advanced mode)
Step6 - Define preprocessing (Advanced mode)
Step7 - Specify Intensity Distribution (Advanced mode)
Step7b - Plot class Distribution (Advanced mode)
Step8 - Edit node-based parameters (Advanced mode)
Step9 - Run Segmentation (Advanced mode)
Step9 (3DView)
