MICCAI 2010 Tutorial Notes

Note to Tutorial Speakers: please post below the material of your presentation to be included in a USB key for the tutorial participants.

As requested by MICCAI organizers, the dead-line for submitting the materials is August 15,2010.

NA-MIC Tutorial at MICCAI 2010: list of materials to include (slides, publications, software, data...)

• Tutorial flyer

• Introduction and goals of the workshop (no materials)
• Overview of the National Alliance for Medical Image Computing (NA-MIC) (Kikinis)
• NA-MIC Programming Environment - SPujol
• 'Hardening' your software with the NA-MIC kit, regression tests and dashboard (Aylward/Tao)
• Building bridges between complementary medical image analysis platforms (e.g. Freesurfer, BRAINS2, HAMMER) (Pujol)
• How to participate in NA-MIC: collaboration grants, user and developer community (Kikinis)
• Image Registration (Dinggang Shen)
• Image Segmentation: EM Segmenter (Pohl)
• Automatic Brain Segmentation (Gerig)
• Cortical Thickness Measurements (Styner)
• Diffusion Tensor Imaging (Gerig/Pujol/Styner)
• Image-Guided Therapy (Hata)
• Other examples from the community (Kikinis)
• Optional Hands-on Session: Interfacing your MICCAI algorithm with the NA-MIC open-source toolkit: the ‘Hello Python’ tutorial (Pujol)
  • Windows: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-win32.exe
  • Linux 64: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86_64.tar.gz
  • Linux 32: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86.tar.gz
  • Mac Darwin: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-darwin-x86.tar.gz
  • HelloPythonDataset.zip

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