Difference between revisions of "2014 Winter Project Week QIICR Breakout"
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* Review of what has been accomplished so far | * Review of what has been accomplished so far | ||
**Iowa: | **Iowa: | ||
+ | *** PET metric calculation module is functional (Ethan) | ||
*** TODO: ask Reinhard about sharing the segmentation results for the TCIA shared collection | *** TODO: ask Reinhard about sharing the segmentation results for the TCIA shared collection | ||
**BWH: | **BWH: | ||
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* Discussion of work to be accomplished during project week | * Discussion of work to be accomplished during project week | ||
* Discussion of work in the close future | * Discussion of work in the close future | ||
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+ | Minutes | ||
+ | * Multiframe DICOM: fixes will be needed in CTK, XNAT cannot handle multiframe; | ||
+ | * XNAT (Rick): | ||
+ | ** Multiframe: 1.6.3 released this month (January), multiframe support will be available at that time | ||
+ | ** Support of other modalities: should be able to mix the modalities in series, modalities that are not known should go through | ||
+ | ** XNAT XTK viewer will be available in 1.7 | ||
** Review action items from the past hangout calls | ** Review action items from the past hangout calls |
Revision as of 17:21, 8 January 2014
Home < 2014 Winter Project Week QIICR BreakoutBack to AHM_2014 Agenda
Introduction
This is a meeting for the QIICR team.
Logistics
- Wednesday, Jan 8, 2014, 9-10am Amethyst room
- Attendees
- In-person: Andrey, Ron, Steve, Jayashree, John, Ethan, Nicole
Action Items
- Review of what has been accomplished so far
- Iowa:
- PET metric calculation module is functional (Ethan)
- TODO: ask Reinhard about sharing the segmentation results for the TCIA shared collection
- BWH:
- set up project infrastructure (github, web-site, wiki, Midas, mailing list)
- shared project specific datasets via Midas
- Tools: identified the functionality to be delivered as a Slicer module: DCE modeling tool
- DICOM infrastructure near-term deliverables:
- multiframe for DCE analysis input data: evaluate related parts of the standard, existing converters and capabilities applied to QIN data (see project on QIICR wiki)
- segmentation objects: improve existing support in Slicer to handle multiple segments, improve support in DCMTK (Michael Onken)
- output post-processed DCE series and parametric maps: floating point - have not discussed intermediate solution, David will re-initiate work related to improved support in the standard
- Image repositories:
- Started work on TCIA browser in Slicer (see project on QIICR wiki)
- Reviewed capabilities of XNAT module in Slicer in relation to handling some QIN use cases; approaches to harmonization of DICOM module with the XNAT/TCIA interfaces have been discussed (see notes on QIICR wiki)
- AF to check with Fiona re dataset availability of all the collection for QIN-PROSTATE
- MGH:
- data: NIFTI example available on Midas (Private collection)
- TODO: upload a sample of the dataset for one patient (DICOM anonymized), include annotations by the end of the week
- TODO: investigate integration of FreeSurfer into Slicer as extension, Jayashree will check with Bruce, may not be available on Windows
- Iowa:
- Discussion of work to be accomplished during project week
- Discussion of work in the close future
Minutes
- Multiframe DICOM: fixes will be needed in CTK, XNAT cannot handle multiframe;
- XNAT (Rick):
- Multiframe: 1.6.3 released this month (January), multiframe support will be available at that time
- Support of other modalities: should be able to mix the modalities in series, modalities that are not known should go through
- XNAT XTK viewer will be available in 1.7
- Review action items from the past hangout calls