Difference between revisions of "Moffitt 2014"
From NAMIC Wiki
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C:\Users\<your_user_name>\AppData\Roaming\NA-MIC | C:\Users\<your_user_name>\AppData\Roaming\NA-MIC | ||
** to enable showing hidden folders see http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7 | ** to enable showing hidden folders see http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7 | ||
| − | ** running Slicer python script from the command line: Slicer.exe --no-splash --no-main-window --python-script <script> <arguments> | + | ** running Slicer python script from the command line: |
| + | Slicer.exe --no-splash --no-main-window --python-script <script> <arguments> | ||
| + | ** to see console messages (in python interactor), run without --no-main-window flag | ||
** make sure script name has '/', not '\', as path separator | ** make sure script name has '/', not '\', as path separator | ||
** make sure image volume for the RTSTRUCT is in the input folder | ** make sure image volume for the RTSTRUCT is in the input folder | ||
Revision as of 22:58, 15 December 2014
Home < Moffitt 2014Logistics
Dates: Dec 16-17, 2014
Working meeting times:
- Tue 3-4pm
- Wed 9-10:30am
- Wed 1-3pm
Notes and references for the meeting
- Prerequisites: nightly and stable build of Slicer, Windows 64bit http://download.slicer.org
- DICOM RT conversion
- Prerequisites: SlicerRT extension, conversion script added in the last week's version of SlicerRT
- extensions are located on Windows in
C:\Users\<your_user_name>\AppData\Roaming\NA-MIC
- to enable showing hidden folders see http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7
- running Slicer python script from the command line:
Slicer.exe --no-splash --no-main-window --python-script <script> <arguments>
- to see console messages (in python interactor), run without --no-main-window flag
- make sure script name has '/', not '\', as path separator
- make sure image volume for the RTSTRUCT is in the input folder
- Lung and lesion segmentation
- FastMarching effect in Editor module
- GrowCut effect in Editor module, FastGrowCut extension
- Interfacing Matlab
- MatlabBridge extension
- Tutorial, documentation, teaching videos: http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge
- General introduction user tutorials: http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.3/Training#General_Introduction
- Developer tutorials: http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.3/Training#Tutorials_for_software_developers
- Feature extraction: HeterogeneityCAD extension: http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/HeterogeneityCAD
