SDIWG:Meeting Minutes 20100528
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Contents
NCBC Joint Working Group Meeting
Notes
Friday May 28, 2010: 2:30-3:30 PM EST
Please contact Peter Lyster for information Peter Lyster
SDIWG Meetings Page
Save the date for the next SDWIG tcon/Connect, three months from now: August 20, 2010
Tcon DRAFT Agenda
- Roll Call/Note-taker (Ivo) (5 min)
- Minutes from the last SDIWG tcon February 19, 2010 (5 min)
- Status check on working groups:
- Biositemaps is a technology to address (i) describing, (ii) locating, (ii) querying, (iii) composing or combining, and (iv) navigating/mining biomedical resources. The underlying technology for Biositemaps is the Biomedical Resource Ontology (BRO) V3 and Information Model (IM) which is encapsulated in the Biositemaps Editor. [Biositemaps_and_BRO_JBI-09-2691.pdf | Here is the text of a paper on Biositemaps and BRO that was recently submitted with lead author Jessie Tennenbaum] Please try it out the new query tool: Resource Discovery System (RDS). You can find the NCBC resources by selecting the "Resource Program" tab and then selecting 'NCBC'.
- (Ivo Dinov) Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability.
- Example: CCB Biositemap.RDF
- Original (Standard RDF)
- Extended Biositemap_NCBC_CCB_PL_update021610.rdf
- Extended Biositemap_NCBC_CCB_PL_update021610_ByRef.rdf (scalable by-reference version).
- Example Pipeline workflows (ND_WaveletTransform_WAIR.pipe, ShapeTransform.pipe, ShapeDistance.pipe).
- Pipeline XML Invocation Protocol.
- See also this page.
- iTools/Biositemaps XLS Support (pending validation).
- Example: CCB Biositemap.RDF
- Plans for adoption within and beyond NCBCs: CTSA, NIF, NITRC,IMAG,...
- (Ivo Dinov) Biositemaps.RDF Extension facilitating resource execution, invocation, input/output and process control, and interoperability.
- Scientific Ontologies
- NCBC Driving Biological Projects Interactions and Impact
- NCBC Dissemination and shared calendar: NCBC Dissemination page. The NCBC calendar with NCBC RSS feeds for all centers. Please check it out and provide feedback. (Joy)
- Biositemaps is a technology to address (i) describing, (ii) locating, (ii) querying, (iii) composing or combining, and (iv) navigating/mining biomedical resources. The underlying technology for Biositemaps is the Biomedical Resource Ontology (BRO) V3 and Information Model (IM) which is encapsulated in the Biositemaps Editor. [Biositemaps_and_BRO_JBI-09-2691.pdf | Here is the text of a paper on Biositemaps and BRO that was recently submitted with lead author Jessie Tennenbaum] Please try it out the new query tool: Resource Discovery System (RDS). You can find the NCBC resources by selecting the "Resource Program" tab and then selecting 'NCBC'.
Minutes
- Note taker: [Suggested order of note takers for future meetings:Dinov (This one), Murphy (Next one), Ku, Schroeder, Floratos, Rubenson, Jags]
- Review of February 19, 2010 Minutes
- Attendees:
Action Items
- TBD
