Training:NIH Workshop 2006

Organization

NIH Host:

• Carlo Pierpaoli

NA-MIC Lead:

• Sonia Pujol

Training Workshop Participants

Clinicians and biomedical science researchers interested in training in 3DSlicer, an open-source software for visualization and analysis of medical imaging data.

Training Workshop Logistics

• To sign-up for this event, send an e-mail to Sonia Pujol (spujol at bwh.harvard.edu) with your contact information and any specific training requests.
• The workshop will be held on Thursday April 27 at the NIH in Bethesda, MD. Directions and the room designated for the workshop will be posted in the near future.

Preparation for the Training Workshop -- Important Information for all attendees

All participants must come with their own PC, Linux or MacOS 10.4 laptop computer. Please complete the following items prior to the workshop. Support will be provided as requested.

• Software Installation: Please install the newest version of the Slicer program Slicer2.6 appropriate to the computer you will be bringing to the workshop.
• Data to Download: Please install the tutorial data tutorial-with-dicom.zip.

Draft Agenda 8:30 AM - 5 PM

• 8:30 am - 9:00 am Preliminary session: checking for software and data installation.
• 9:00 am - 9:30 am Goals of Workshop, Introduction to the NAMIC Kit - People-Introductions (Carlo Pierpaoli - Sonia Pujol)
• 9:30 am - 11:15 am Slicer Basics - Hands-on Session 1 (Sonia Pujol)
  • Slicer Interface Overview
  • Loading Data: Volumes, Models, Scenes
  • Interacting with Images and Models
• 11:15 am - 11:30 am Coffee-break
• 11:30 am - 12:30 pm Slicer Basics - Hands-on Session 2 (Sonia Pujol)
  • Saving Volumes
  • Saving Models
  • Saving Scenes
• 12:30 pm - 2:00 pm Lunch Break
• 2:00 pm - 4:00 pm Slicer Advanced - Hands-on Session 3 (Sonia Pujol)
  • NRRD file format tutorial
  • DTMRI module
• 4:00 pm - 4:15 pm Coffee-break
• 4:15 pm - 4:45 pm Users Feedback
• 4:45 pm - 5:00 pm Highlights of the new Slicer3 & Conclusion