Difference between revisions of "Projects:RegistrationLibrary:RegLib C15"
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=== Input === | === Input === | ||
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| − | |[[Image | + | |[[Image:RegLib_C15_Fiducials.png|150px|lleft|this is the fixed reference image. All images are aligned into this space]] |
| − | |[[Image: | + | |[[Image:RegArrow_Rigid.png|100px|lleft]] |
|[[Image:RegLib_C15_MRI.png|150px|lleft|this is the moving image. The transform is calculated by matching this to the reference image]] | |[[Image:RegLib_C15_MRI.png|150px|lleft|this is the moving image. The transform is calculated by matching this to the reference image]] | ||
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=== Modules === | === Modules === | ||
| − | *[ | + | *[https://www.slicer.org/wiki/Modules:ACPCTransform-Documentation-3.6 '''AC-PC Transform'''] |
| − | *[ | + | *[https://www.slicer.org/wiki/Modules:Fiducials-Documentation-3.6 Fiducials] |
=== Keywords === | === Keywords === | ||
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===Input Data=== | ===Input Data=== | ||
| − | * | + | *moving: T1 MPRAGE 1x1x1 mm voxel size |
===Registration Challenges=== | ===Registration Challenges=== | ||
Latest revision as of 18:05, 10 July 2017
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Contents
v3.6.1 
Slicer Registration Library Case #15:
Brain MR Alignment along AC-PC line
Input
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| fixed image/target | moving image |
Modules
Keywords
MRI, brain, head, anterior commissure, posterior commissure, AC-PC Line, Talairach, fiducial alignment
Input Data
- moving: T1 MPRAGE 1x1x1 mm voxel size
Registration Challenges
- A dedicated module for AC-PC alignment is used.
- the only difficulty lies with accurate placement of the AC-PC fiducials. Depending on image resolution and contrast these can be difficult to find.
- midline fiducials should be easily obtainable from axial and coronal views. 3 midline fiducials suffice; more is recommended for a more robust solution.
Key Strategies
- this is a special case of fiducial-based alignment. Instead of aligning two sets of fiducial pairs, only one set of fiducials is aligned with a predefined orientation: The plane defined by the midline fiducials is aligned to be vertical in coronal/axial views, and the line defined by the AC-PC line is rotated to be horizontal in a sagittal view.
Registration Results
Download
- Data
- Presets
- Documentation
