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Back to [[Cores|NA-MIC Cores]]
 
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==Introduction==
 
==Introduction==
 
{| border="00" cellpadding="5" cellspacing="0"
 
{| border="00" cellpadding="5" cellspacing="0"
 
|-
 
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The National Alliance for Medical Image Computing,NA-MIC, is a network of peers. The overall goals of NA-MIC are multi-layered:
+
The National Alliance for Medical Image Computing,NA-MIC, is a network of peers consisting of computer scientists, engineers and biomedical researchers. NA-MIC has multiple goals which include:
*creating a medical image computing platform
+
*<big>'''Enabling of biomedical research:''' [[DBP2:Main|see DBP's]], [[NA-MIC_External_Collaborations| see external collaborations]].</big>
*performing research on novel image analysis algorithms
+
*Reaching out to the research community [[Service:Main|service]], [[Training:Main|training]], and [[Dissemination:Main|dissemination]].
*deploying these capabilities to enable biomedical research
+
*Creating the [[NA-MIC-Kit|NA-MIC Kit]], a platform for delivering the results of our research
 +
*Computer science research in [[Algorithm:Main|image analysis algorithms]] and [[Engineering:Main|software engineering]]
  
The main role of the leadership of this enterprise is to set the longterm and short term goals for the alliance. This requires close consultation and coordination with and among the participants of NA-MIC.
+
The main role of the leadership of this enterprise is to set the long term and short term goals for the Alliance. This requires close consultation and coordination with and among the participants of NA-MIC.
A secondary rols of the leadership core is to present NA-MIC to the outside world, including NIH and the biomedical and medical image computing communities.
+
A secondary role of the leadership core is to present NA-MIC to the outside world, including NIH, the biomedical and medical image computing communities.
| style="background: #ebeced" colspan="2" align="center"| <b>NA-MIC Locations</b>
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| style="background: #ebeced" colspan="2" align="center"| <b>NA-MIC Activities</b>
 
|-
 
|-
| style="background: #ebeced"|[[Image:NA-MIC-2007.jpg|center|250px|Map of NA-MIC locations]]  
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| style="background: #ebeced"|[[image:Full body geoanatomy international-illustration-05192010-800.png|center|350px|NA-MIC activities]]  
| style="background: #ebeced"|NA-MIC is a National Alliance with funded activities in a variety of locations throughout the United States. [[Media:NA-MIC-on-Google-Earth.zip|Google Earth "My Places" file]]
+
| style="background: #ebeced"|NA-MIC is a National Alliance with funded activities in a variety of disease processes, geographic locations and, anatomic regions.
 
|}
 
|}
 
<br>
 
<br>
 
== Highlights ==
 
 
* [[DBP_changeover|2007 DBP changeover]]
 
* [[EAB|External Advisory Board ]]
 
* [[NA-MIC_message|NA-MIC message ]]
 
  
 
== Regular Meetings ==
 
== Regular Meetings ==
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* Regular phone calls with core PI's
 
* Regular phone calls with core PI's
  
== Ongoing Activities ==
+
==Activities ==
* March 09, 2008: [[Leadership:Amia-workshop-2008|Translational Bioinformatics Panel]]
+
===2014===
* January 17, 2008: [[Leadership:GT-visit-2008|Visit of Georgia Tech in Jan 2008]]
+
*Juli 1 2014: [[Post-NCBC-2014|2014 Post NCBC Funding]]
* January 08, 2008: [[Leadership:Slicer3-compilation-2008|Slicer3 compilation discussion]]
+
*May 1: [http://research.cs.queensu.ca/calendar/Kikinis.pdf Queens University School of Computing Distinguished Seminar]. See [[media:2014-04-30-Kikinis-Slicer.pdf|here]] for the presentation.
* October 25, 2007: [[media:Kikinis-AIST-10-25-2007.ppt|Presentation about Open Source in Robotics]]
+
----
* October 12, 2007: [[Leadership:SlicerIGT_2007|Discussion about Slicer and IGT]]
+
*March 5-9: Keynote speech at [http://gsdm.u-tokyo.ac.jp/?p=37# GSDM Inauguration Symposium], Tokyo, Japan.
* October 11, 2007: [[media:Kikinis-IGTa-10-11-2007.ppt|The Application of Open Source Concepts to Image Guided Therapy]] Plenary Session talk at [http://www.curac.org/2007/programm/indexDo.php.htm CURAC]
+
 
* October 3, 2007: Ron Kikinis presenting at IIC, Harvard: [http://www.iic.harvard.edu/seminars/100307.html Medical Image Computing: From Data to Understanding], [http://stream.fas.harvard.edu/ramgen/permanent/IIC/Seminars/10.03.2007.rm Video of the presentation], [[media:Kikinis-IIC-10-03-2007.ppt|PPT of the presentation]]
+
===2013===
* September-01-07: [[Leadership:Publications_Database_2007|Publications database introduced]]
+
*December 16-17: Invited talk at the [http://academicdepartments.musc.edu/musc/ Medical University of South Carolina], Charleston, SC.
* September-2007: [[Leadership:DBP2-2007-Pojects| Projects for the DBP's in 2007]]
+
*December 1: [[RSNA_2013|RSNA 2013]]
* June-08-2007: [[2007_Materials_for_NCBC_Program_Review|Answers to the questions by the NCBC study section]]
+
----
* April-15-2007: [http://www.biomedicalimaging.org/Plenaries.asp ISBI Plenary Session] [[media:Kikinis-ISBI-04-15-2007.ppt |Lecture]] about MIC.
+
*November 28, 2013: The [http://www.curac.org/ CURAC society] awards the [https://www.i-med.ac.at/pr/presse/2013/58.html inaugural honorary membership] to Ron Kikinis during the 12th annual meeting of that society in Innsbruck, Austria. (see also [http://www.voxelmaster.at/news/curac-2013-was-a-great-success.ibk 1], [https://www.i-med.ac.at/mypoint/news/678450.html 2]). See [[media:2013-11-28-Kikinis-CURAC-as presented.pdf|here]] for the presentation.
* AHM 2007: [[AHM_2007:Core_1_2_Site_PI_Mid_Cycle_Review|Strategy Planning for competitive renewal]]
+
----
* November-21-2006: NA-MIC and NAC presentations at the DKFZ in Heidelberg
+
*October: [[2013PostDTIChanllenge|after the 2013 DTI Challenge]]
* October-26-2006: [[Oct-26-2006-MIND-visit|Visiting the MIND institute]]
+
----
* Sept-06-2006, [http://www.ibmisps.org/pdf/InformationparticipantsANGLAIS.pdf 2006 IBMISPS conference:] [[Media:Kikinis-IBMISPS-09-06-2006.ppt|talk]] by R. Kikinis about FOSS
+
*September 30: [[Changchun_2013| 3D Slicer invited seminar]], Changchun, China.
* May 5 2006: Meeting with Andy Cedilnik at 1249 Boylston to review plans for wiki based maintenance for the NA-MIC website
+
*September 29: [[Beijing_2013| 3D Slicer invited workshop, PLA Hospital]], Beijing, China.
* April 24, 2006 [http://www.nimh.nih.gov/neuroinformatics/springagenda2006.cfm The Human Brain Project: Linking Within and Beyond] Natcher Conference Center, NIH Campus, Bethesda, Maryland: National Alliance for Medical Image Computing: Science & Technology of One National Center for Biomedical Computing [[Media:NA-MIC_Kit_revised.ppt| (this is a slightly modified version of the presentation)]]
+
*September 25: [http://www.miccai2013.org/social_event04.html Special Session (Panel Discussion):"How do our experts see the future of medical imaging and computer assisted interventions?"], Nagoya, JP. Rons slides [[media:2013-09-24-Kikinis-Future.pptx|here]].
* April 18 2006: [http://www.neurovia.umn.edu/scivis/ Scientific Visualization 2006 Workshop, University of Minnesota, Minneapolis]<nowiki>: 3D SLICER: An Open Source Tool for Subject-Specific Data Analysis </nowiki>[[Media:Slicer.ppt| abridged presentation ppt (20MB)]] [[Media:3tenors.jpg| snapshot of the three presenters]]
+
*September 22: [[MICCAI2013| MICCAI 2013 DTI Tractography Challenge on Peritumoral White Matter Anatomy for Neurosurgical Decision-Making]]
* April 08 2006: ISBI conference SA-AM-SS1: Towards Vertical Integration of Biomedical Data [[Media:ISBI-04-08-2006.ppt| presentation ppt]]
+
*September 5-7: Invited Keynote Lecture at the international [https://www.smit2013.com/index.php?id=152 SMIT 2013] conference. Baden-Baden, Germany.
 +
*September 2: Invited Plenary Lecture at the opening event of the [http://www.gmds2013.de/index.php?id=35 GMDS] conference. Lübeck, Germany.
 +
----
 +
*July 29-30: Workshop on Enhancing Training for Biomedical Big Data, Rockville, MD, ([http://bd2k.nih.gov/pdf/BD2K%20Training%20Workshop%20Description%20and%20Agenda.pdf Program])
 +
----
 +
*June 17-21: [[2013_Summer_Project_Week|'''Summer Project Week at MIT]]'''
 +
----
 +
*April 10-11: [http://www.na-mic.org/Wiki/index.php/Iwate_2013_Training  Slicer Ultrasound Workshop], Iwate, Japan.
 +
*April 9: [http://www.na-mic.org/Wiki/index.php/Tokyo_2013_Training  Slicer Workshop], Tokyo, Japan.
 +
----
 +
*January 7-11: [[AHM_2013|'''AHM, EAB, Winter Project Week in Salt Lake City]]'''
 +
===2012===
 +
*November 8-9 2012: [http://meetings.nigms.nih.gov/index.cfm?event=general&ID=15208 NCBC showcase event in Washington DC]: [[media:NA-MIC-Overview-2012-11.pdf|PDF of the overview slides]]
 +
 
 +
{| border="00" cellpadding="8" cellspacing="0"
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|-
 +
|style="background: #ebeced"| [[image:NA-MIC-Overview-2012-11-Slide1.png|400px| NA-MIC 2012 in numbers]]
 +
|style="background: #ebeced"| [[image:NA-MIC-Overview-2012-11-Slide2.png|400px| Traumatic Brain Injury (TBI): a DBP for Na-mic. The goal of the project is to develop quantitative measures for the prediction of outcome in patients with moderate to severe brain trauma. Clinical: UCLA, algorithm research: UTAH, UNC, Kitware, engineering: UCLA, Kitware, GE. Software platform for delivery to the community: 3D Slicer (this is going to happen during next year)]]
 +
|-
 +
|}
 +
<br>
 +
*September: Raise the visibility of MIC: [http://en.wikipedia.org/wiki/Medical_Image_Computing Wikipedia page], [[Call_for_Identification_of_Medical_Image_Computing_Grant_Applications|call for identifying MIC grants submitted to NIH]]
 +
----
 +
*August 31: [[2012-Nov-NIH-event-planning|Tcon for planning Nov NIH event]]
 +
----
 +
*May: Visit to Australia with presentations in Sydney, Melbourne, Perth, Australia.
 +
{| border="00" cellpadding="8" cellspacing="0"
 +
|-
 +
|style="background: #ebeced"| [[image:2012-05-17-From-algorithms-to-tools.png|400px| From algorithms to tools]]
 +
|style="background: #ebeced"| [[image:2012-05-17-Is-it-worth-doing.png|400px| Is it worth doing?]]
 +
|-
 +
|}
 +
<br>
 +
===2011===
 +
*November 27: [[RSNA_2011#Agenda|Slicer 4 release at RSNA]], Chicago, IL.
 +
*November 16: Opening lecture at CASEIB, Carceres, Spain.
 +
*November 6: Slicer course at AAGL, Ft. Lauderdale, FL.
 +
----
 +
*October 20: [[2011_Slicer4-Documentation-Sprint|Slicer 4 Documentation Sprint]]
 +
*October 14-15: [[2011_Algorithms_Retreat|Algorithm Core retreat]]
 +
*October 12-13: [http://www.ncigt.org/pages/IGT_Workshop_2011 IGT workshop],Washington DC.
 +
*October 7: Presentation at UBC
 +
----
 +
*September 18: [[Events:_DTI_Tractography_Challenge_MICCAI_2011|DTI challenge at Miccai]]
 +
----
 +
* August 24: [[Events:2011-08-24-DICOM-ITK-Discussion|Dicom ITK discussion]]
 +
----
 +
* June 15: [[Events:2011-06-15-Robarts-Slicer-Workshop|Slicer Workshop]], Biomedical Imaging Research Centre at the University of Western Ontario
 +
----
 +
* May 11-12: [http://idash.ucsd.edu/index.php/news-a-events/symposiums iDASH Symposium: Integrating Data for Analysis, Anonymization, and Sharing] Namic presentation on day 1). The Great Hall, University of California, San Diego, CA.
 +
----
 +
* April 23-30: [[Event:2011-04-23-Roadtrip-Japan|Roadtrip in Japan]].
 +
* April 22:[[Event:2011-04-UtahDBP-Training|Working meeting with the AFIB DBP]], Salt lake City, UT.
 +
* April 5: [[media:2011-04-05-Slicer and the NA-MIC kit-upload.ppt|Presentation]], JHU. See [[Events:_Johns_Hopkins_University_Seminar_April_2011|here]] for the entire event.
 +
----
 +
* January 24: [[media:Slicer and the NA-MIC kit-short.ppt|Presentation]] at the [http://idash.ucsd.edu/index.php/news-a-events/workshops iDASH Workshop] about the secondary use of clinical images for biomedical research.
 +
===2010===
 +
* December: [[2010-12-IGT-Survery|Survey of IGT activities]]
 +
----
 +
* November 8-9: [[2010-WestCoastMaster|West Coast Events]]
 +
* November 5-6: [[AlgorithmRetreat2010|Algorithm Core retreat]]
 +
* November 4-6: [[WidgetDesign2010|Widget Design Fiesta, Kitware]], South Carborro, NC.
 +
----
 +
* September 28: Visit at UCLA: preparation for DBP activities, talk
 +
* September 23: [[Beijing_2010_NA-MIC_Workshop|Slicer Tutorial at Chinese PLA General Hospital]] Beijing, China.
 +
* September 20: [[MICCAI_2010| NA-MIC Tutorial at MICCAI 2010]], Beijing, China.
 +
----
 +
* August 26: [[2010-09-Leadership-Brainstorming|Planning renewal activities]]
 +
* August 5: [http://www.termine-meduniwien.at/mediafiles/38/Vortragsankuendigung_Prof_Ron_KIKINIS_05082010.pdf?sid=4f2a2b592fc7004cea39a34993b1d72d Presentation at the AKH], Vienna, Austria.
 +
----
 +
* June 28: [[media:Kikinis-ITK-2010-06-28.ppt|Presentation]] at the [http://visual.nlm.nih.gov/itk/itk2010/agenda.html ITK 10th Anniversary].
 +
----
 +
* April 9-10: [[2010_University.of.Iowa#Workshop_Agenda| Slicer Training at the University of Iowa]], Iowa City, IA.
 +
----
 +
* March 16: [[Events:Slicer-Hands-On-Tokyo-2010|Presentation at the Slicer training events: Tokyo Women's Medical University]], Tokyo, Japan.
 +
* March 15: Presentations at Tokyo University, Department of Radiology, Department of Mechanical Engineering and Biomedical Engineering. See [[media:Kikinis-Tokyo-2010-03-15.ppt|here]] for the presentation.
 +
* March 11: Presentation at the AMIA translational bioinformatics workshop in SF. See [[media:Kikinis-NA-MIC-2010-03-10.ppt|here]] for the presentation.
 +
* March 11: Visit and Slicer presentation at the SF, VA.
 +
----
 +
* Feb 9-11: Collaboration visit in SLC, Utah. Meeting with the autism and cardiac projects people.
 +
* February 5: [https://www.slicer.org/wiki/Documentation-Rons-Rules-For-Tools Rons rules for tools]
 +
----
 +
* January 8: NA-MIC competitive renewal submitted
 +
===2009===
 +
* October 1: [[Leadership:RKBiomedComp2009|Lecture at MIT biomedical computing class]]
 +
* October 1: [[Projects:ARRASuplements|ARRA Supplements]]
 +
----
 +
* September 24: Ron Kikinis awarded the inaugural [http://www.miccai.org/miccai-2009-london Enduring Impact Award] of the MICCAI Society during the annual meeting, London, UK.
 +
* September 10: [[media:WestinWC09-Sep10-2009.ppt|Open Source Software as an Enabler of Science]]. Word Congress 2009 [http://www.wc2009.org/World-Congress-2009/Pages/Home.aspx Medical Physics and Biomedical Engineering], Munich, Germany.
 +
----
 +
* June 29: [[media:3D-Slicer-presentation-June-29-2009.ppt|Presentation about 3D Slicer]]. Working meeting about a common toolkit.
 +
* June 18: [[media:2009-06-18-Kikinis-CAOS.ppt|Open Source Software as Enabler of Research]]. Presidential Guest Lecture at the 9th Annual Meeting of the International Society for Computer Assisted Orthopedic Surgery
 +
* June 4: [[media:2009-06-Kikinis-Mevis.ppt|Presentation at MEVIS]]
 +
----
 +
* May 11-12: Core 1 visit to Georgia Tech: brainstorming for competitive renewal
 +
* May 5-4: Core 2 visit to Georgia Tech: brainstorming for competitive renewal
 +
----
 +
* February 27: [[Media:NCI-Slicer3-2009-02-25.ppt|Visit at NCI]] to explore interactions with CaBIG and the intramural animal imaging program
 +
===2008===
 +
* October November December 2008: Multiple trips and meetings to scope out next generation DBP's
 +
----
 +
* September: MICCAI, Core 1 PI get together
 +
----
 +
* August: NCBC AHM meeting in Bethesda
 +
----
 +
* July: Planning of next generation DBPs begins
 +
* June: Participation in the Project week
 +
----
 +
* June: Participation in the Germany outreach event
 +
----
 +
* April: Na-mic presentation at McMaster University
 +
----
 +
* March 13: [[Leadership:Allen-Institute-visit-03-2008|Visit at Allen Brain Institute]], Seattle, VA.
 +
* March 12: [[Leadership:Intuitive-visit-03-2008|Visit at Intuitive in Sunnyvale]]
 +
* March 09: [[media:NA-MIC 2008.ppt|Presentation]] for the [http://www.amia.org/meetings/stb08/index.asp AMIA Translational Bioinformatics Summit]
 +
----
 +
* January 17: [[Leadership:GT-visit-2008|Visit of Georgia Tech]]
 +
* January 8: [[Leadership:Slicer3-compilation-2008|Slicer3 compilation discussion]]
 +
===2007===
 +
* October 25: [[media:Kikinis-AIST-10-25-2007.ppt|Presentation about Open Source in Robotics]]
 +
* October 12: [[Leadership:SlicerIGT_2007|Discussion about Slicer and IGT]]
 +
* October 11: [[media:Kikinis-IGTa-10-11-2007.ppt|The Application of Open Source Concepts to Image Guided Therapy]] Plenary Session talk at [http://www.curac.org/2007/programm/indexDo.php.htm CURAC]
 +
* October 3: Ron Kikinis presenting at IIC, Harvard: [http://www.iic.harvard.edu/seminars/100307.html Medical Image Computing: From Data to Understanding], [http://stream.fas.harvard.edu/ramgen/permanent/IIC/Seminars/10.03.2007.rm Video of the presentation], [[media:Kikinis-IIC-10-03-2007.ppt|PPT of the presentation]]
 +
----
 +
* September 1-7: [[Leadership:Publications_Database_2007|Publications database introduced]]
 +
* September: [[Leadership:DBP2-2007-Pojects| Projects for the DBP's in 2007]]
 +
----
 +
* June 8: [[2007_Materials_for_NCBC_Program_Review|Answers to the questions by the NCBC study section]]
 +
----
 +
* April 15: [http://www.biomedicalimaging.org/Plenaries.asp ISBI Plenary Session] [[media:Kikinis-ISBI-04-15-2007.ppt |Lecture]] about MIC.
 +
----
 +
* January: [[AHM_2007:Core_1_2_Site_PI_Mid_Cycle_Review|Strategy Planning for competitive renewal]]
 +
===2006===
 +
* November 21: NA-MIC and NAC presentations at the DKFZ, Heidelberg, Germany.
 +
----
 +
* October 26: [[Oct-26-2006-MIND-visit|Visiting the MIND institute]]
 +
----
 +
* September 6: [http://www.ibmisps.org/pdf/InformationparticipantsANGLAIS.pdf 2006 IBMISPS conference:] [[Media:Kikinis-IBMISPS-09-06-2006.ppt|talk]] by R. Kikinis about FOSS
 +
----
 +
* May 5: Meeting with Andy Cedilnik at 1249 Boylston to review plans for wiki based maintenance for the NA-MIC website
 +
----
 +
* April 24: [http://www.nimh.nih.gov/neuroinformatics/springagenda2006.cfm The Human Brain Project: Linking Within and Beyond] Natcher Conference Center, NIH Campus, Bethesda, Maryland: National Alliance for Medical Image Computing: Science & Technology of One National Center for Biomedical Computing [[Media:NA-MIC_Kit_revised.ppt| (this is a slightly modified version of the presentation)]]
 +
* April 18: [http://www.neurovia.umn.edu/scivis/ Scientific Visualization 2006 Workshop, University of Minnesota, Minneapolis]<nowiki>: 3D SLICER: An Open Source Tool for Subject-Specific Data Analysis </nowiki>[[Media:Slicer.ppt| abridged presentation ppt (20MB)]] [[Media:3tenors.jpg| snapshot of the three presenters]]
 +
* April 8: ISBI conference SA-AM-SS1: Towards Vertical Integration of Biomedical Data [[Media:ISBI-04-08-2006.ppt| presentation ppt]]
 +
----
 
* March 23: TCON among Core PIs on the selection of next generation DBPs.
 
* March 23: TCON among Core PIs on the selection of next generation DBPs.
 
* March 17: TCON among Core PIs on the new format of annual scientific report by projects, not by cores.
 
* March 17: TCON among Core PIs on the new format of annual scientific report by projects, not by cores.
* March 11-30, 2006: Pre-selection of next generation of NAMIC-DBPs and the phase out plan of existing ones.
+
* March 11-30: Pre-selection of next generation of NAMIC-DBPs and the phase out plan of existing ones
* January 8-13, 2006: The second All-Hands-Meeting and Programming event in Salt Lake City, Utah
+
----
* Dec-12-2005 Start NCBC Evaluation TCON with a total of seven NCBC centers
+
* January 8-13: The second All-Hands-Meeting and Programming event, Salt Lake City, UT.
* Nov-18-2005 Initial T-con with EAB
+
===2005===
* Sept-Oct 2005 Closing of accounts and preparing Carryforward Request
+
* December 12: Start NCBC Evaluation TCON with a total of seven NCBC centers
* July 2005 External Advisory Board (EAB) is formed
+
----
* May-June 2005 Coordination with all sites to prepare the Annual Progress Report as well as Carryforward explanations.
+
* November 18: Initial T-con with EAB
* May-Oct 2005 Interaction with ISC (ITK Software Consortium) as well as Partners OGC (Office of General Counsel) about Slicer Licensing
+
----
* Apr 14 2005 NAMIC management "office hours"
+
* September-October: Closing of accounts and preparing Carryforward Request
* Apr 9 2005 Coordination of Core 3, prospective IRB issues (CAMH, UCI, and Dartmouth no need for new IRBs. VA/Harvard filing soon)
+
----
* Mar 30 2005 NAMIC accomplishment snapshot for NIH
+
* July: External Advisory Board (EAB) is formed
* Feb 1-18 2005 Harvard, Dartmouth and UCI data cleaned, validated and uploaded
+
----
* Feb 7 2005 Attended NIH-NCBC Evaluation Liaisons Conference Call Meeting
+
* May-June: Coordination with all sites to prepare the Annual Progress Report as well as Carryforward explanations.
* Jan 12 2005 Secondary-use IRB approved by Partners
+
* May-Oct: Interaction with ISC (ITK Software Consortium) as well as Partners OGC (Office of General Counsel) about Slicer Licensing
* Dec 21 2004 Filed Secondary-use IRB for data-sharing with Partners' IRB (for use of VA/Harvard and Dartmouth data)
+
----
* Dec 17 2004 Dartmouth's Secondary-use IRB for restrospective data approved for sharing with NAMIC
+
* April: NAMIC management "office hours"
* Dec 10 2004 Coordinated with MIT/VA/Harvard to start a straw-man proposal for data-sharing policy for NAMIC
+
* April 9: Coordination of Core 3, prospective IRB issues (CAMH, UCI, and Dartmouth no need for new IRBs. VA/Harvard filing soon)
* Dec 8 2004 Attend NCBC meeting in NIH
+
----
* Nov 30 2004 VA/Harvard's Secondary-use IRB for restrospective data approved for sharing with NAMIC
+
* March 30: NAMIC accomplishment snapshot for NIH
* Nov 20 2004 Finalized schedule for all-hand meeting on Feb 5 2004, Salt Lake City, Utah
+
----
* Nov 7 2004 Defined master project plan for NAMIC Year 1 activities and worked with Core 4 to post it on NAMIC website.
+
* Feb 1-18: Harvard, Dartmouth and UCI data cleaned, validated and uploaded
* Nov 3 2004 Identified two potential collaborative projects, one in diGeorge brain MRI imaging genome and the other in COPD lung cancer CT imaging genome with investigators from I2B2, another NCBC at Harvard.
+
* February 7: Attended NIH-NCBC Evaluation Liaisons Conference Call Meeting
* Oct 15 2004 Host first NAMIC kickoff meeting @ Stata Center, MIT, MA
+
----
* Oct 14 2004 Meet with NIH program managers and Art Toga--the PI of another NCBC imaging related Center--@ BWH Radiology Boylston Lab
+
* January 12: Secondary-use IRB approved by Partners
* Oct 10 2004 Start working with all cores on the multi-institutional IRBs for NAMIC.
+
===2004===
* Oct 5 2004 Leadership core planning on NAMIC kick-off meeting
+
* December 21: Filed Secondary-use IRB for data-sharing with Partners' IRB (for use of VA/Harvard and Dartmouth data)
* Oct 1 2004 Set up NAMIC emailing groups
+
* December 17: Dartmouth's Secondary-use IRB for restrospective data approved for sharing with NAMIC
 +
* December 10: Coordinated with MIT/VA/Harvard to start a straw-man proposal for data-sharing policy for NAMIC
 +
* December 8: Attend NCBC meeting in NIH
 +
----
 +
* November 30: VA/Harvard's Secondary-use IRB for retrospective data approved for sharing with NAMIC
 +
* November 20: Finalized schedule for all-hand meeting on Feb 5 2004, Salt Lake City, Utah
 +
* November 7: Defined master project plan for NAMIC Year 1 activities and worked with Core 4 to post it on NAMIC website.
 +
* November 3: Identified two potential collaborative projects, one in diGeorge brain MRI imaging genome and the other in COPD lung cancer CT imaging genome with investigators from I2B2, another NCBC at Harvard.
 +
----
 +
* October 15: Host first NAMIC kickoff meeting @ Stata Center, MIT, MA
 +
* October 14: Meet with NIH program managers and Art Toga--the PI of another NCBC imaging related Center, BWH Radiology Boylston Laboratory
 +
* October 10: Start working with all cores on the multi-institutional IRBs for NAMIC.
 +
* October 5: Leadership core planning on NAMIC kick-off meeting
 +
* October 1: Set up NAMIC emailing groups
 +
 
 +
== Highlights ==
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* [[DBP_changeover|DBP Changeover]]
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* [[EAB|External Advisory Board ]]
  
 
== Misc. Information ==
 
== Misc. Information ==
 
 
* [[Other_Support|Other Support]]
 
* [[Other_Support|Other Support]]
 
* [[Dr._Alving_visit|Dr. Alving 2005 visit]]
 
* [[Dr._Alving_visit|Dr. Alving 2005 visit]]
 
* [[Time_spent_on_evaluation|Time spent on evaluation]]
 
* [[Time_spent_on_evaluation|Time spent on evaluation]]
 
* [[Relative Roles Core1 Core2 Core3| This is a whitepaper defining the roles of the 3 main cores]]
 
* [[Relative Roles Core1 Core2 Core3| This is a whitepaper defining the roles of the 3 main cores]]
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* [[Image:CT-Volrend-1-2009.zip|Testdata for volume rendering]]

Latest revision as of 18:07, 10 July 2017

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Introduction

The National Alliance for Medical Image Computing,NA-MIC, is a network of peers consisting of computer scientists, engineers and biomedical researchers. NA-MIC has multiple goals which include:

The main role of the leadership of this enterprise is to set the long term and short term goals for the Alliance. This requires close consultation and coordination with and among the participants of NA-MIC. A secondary role of the leadership core is to present NA-MIC to the outside world, including NIH, the biomedical and medical image computing communities.

NA-MIC Activities
NA-MIC activities
NA-MIC is a National Alliance with funded activities in a variety of disease processes, geographic locations and, anatomic regions.


Regular Meetings

  • Weekly Engineering Tcons
  • Monthly Algorithm Tcons
  • Regular phone calls with core PI's

Activities

2014


2013





  • July 29-30: Workshop on Enhancing Training for Biomedical Big Data, Rockville, MD, (Program)



2012

NA-MIC 2012 in numbers Traumatic Brain Injury (TBI): a DBP for Na-mic. The goal of the project is to develop quantitative measures for the prediction of outcome in patients with moderate to severe brain trauma. Clinical: UCLA, algorithm research: UTAH, UNC, Kitware, engineering: UCLA, Kitware, GE. Software platform for delivery to the community: 3D Slicer (this is going to happen during next year)




  • May: Visit to Australia with presentations in Sydney, Melbourne, Perth, Australia.
From algorithms to tools Is it worth doing?


2011

  • November 27: Slicer 4 release at RSNA, Chicago, IL.
  • November 16: Opening lecture at CASEIB, Carceres, Spain.
  • November 6: Slicer course at AAGL, Ft. Lauderdale, FL.




  • June 15: Slicer Workshop, Biomedical Imaging Research Centre at the University of Western Ontario



2010







  • March 16: Presentation at the Slicer training events: Tokyo Women's Medical University, Tokyo, Japan.
  • March 15: Presentations at Tokyo University, Department of Radiology, Department of Mechanical Engineering and Biomedical Engineering. See here for the presentation.
  • March 11: Presentation at the AMIA translational bioinformatics workshop in SF. See here for the presentation.
  • March 11: Visit and Slicer presentation at the SF, VA.

  • Feb 9-11: Collaboration visit in SLC, Utah. Meeting with the autism and cardiac projects people.
  • February 5: Rons rules for tools

  • January 8: NA-MIC competitive renewal submitted

2009




  • May 11-12: Core 1 visit to Georgia Tech: brainstorming for competitive renewal
  • May 5-4: Core 2 visit to Georgia Tech: brainstorming for competitive renewal

  • February 27: Visit at NCI to explore interactions with CaBIG and the intramural animal imaging program

2008

  • October November December 2008: Multiple trips and meetings to scope out next generation DBP's

  • September: MICCAI, Core 1 PI get together

  • August: NCBC AHM meeting in Bethesda

  • July: Planning of next generation DBPs begins
  • June: Participation in the Project week

  • June: Participation in the Germany outreach event

  • April: Na-mic presentation at McMaster University


2007





2006

  • November 21: NA-MIC and NAC presentations at the DKFZ, Heidelberg, Germany.



  • May 5: Meeting with Andy Cedilnik at 1249 Boylston to review plans for wiki based maintenance for the NA-MIC website


  • March 23: TCON among Core PIs on the selection of next generation DBPs.
  • March 17: TCON among Core PIs on the new format of annual scientific report by projects, not by cores.
  • March 11-30: Pre-selection of next generation of NAMIC-DBPs and the phase out plan of existing ones

  • January 8-13: The second All-Hands-Meeting and Programming event, Salt Lake City, UT.

2005

  • December 12: Start NCBC Evaluation TCON with a total of seven NCBC centers

  • November 18: Initial T-con with EAB

  • September-October: Closing of accounts and preparing Carryforward Request

  • July: External Advisory Board (EAB) is formed

  • May-June: Coordination with all sites to prepare the Annual Progress Report as well as Carryforward explanations.
  • May-Oct: Interaction with ISC (ITK Software Consortium) as well as Partners OGC (Office of General Counsel) about Slicer Licensing

  • April: NAMIC management "office hours"
  • April 9: Coordination of Core 3, prospective IRB issues (CAMH, UCI, and Dartmouth no need for new IRBs. VA/Harvard filing soon)

  • March 30: NAMIC accomplishment snapshot for NIH

  • Feb 1-18: Harvard, Dartmouth and UCI data cleaned, validated and uploaded
  • February 7: Attended NIH-NCBC Evaluation Liaisons Conference Call Meeting

  • January 12: Secondary-use IRB approved by Partners

2004

  • December 21: Filed Secondary-use IRB for data-sharing with Partners' IRB (for use of VA/Harvard and Dartmouth data)
  • December 17: Dartmouth's Secondary-use IRB for restrospective data approved for sharing with NAMIC
  • December 10: Coordinated with MIT/VA/Harvard to start a straw-man proposal for data-sharing policy for NAMIC
  • December 8: Attend NCBC meeting in NIH

  • November 30: VA/Harvard's Secondary-use IRB for retrospective data approved for sharing with NAMIC
  • November 20: Finalized schedule for all-hand meeting on Feb 5 2004, Salt Lake City, Utah
  • November 7: Defined master project plan for NAMIC Year 1 activities and worked with Core 4 to post it on NAMIC website.
  • November 3: Identified two potential collaborative projects, one in diGeorge brain MRI imaging genome and the other in COPD lung cancer CT imaging genome with investigators from I2B2, another NCBC at Harvard.

  • October 15: Host first NAMIC kickoff meeting @ Stata Center, MIT, MA
  • October 14: Meet with NIH program managers and Art Toga--the PI of another NCBC imaging related Center, BWH Radiology Boylston Laboratory
  • October 10: Start working with all cores on the multi-institutional IRBs for NAMIC.
  • October 5: Leadership core planning on NAMIC kick-off meeting
  • October 1: Set up NAMIC emailing groups

Highlights

Misc. Information