Difference between revisions of "NA"
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| − | '''Objective:''' | + | '''Objective:''' |
| − | + | * Extend the power of Slicer3 by integrating the Teem libraries and command-line tools (e.g. "unu"). | |
| − | [[ | + | '''Progress:''' |
| + | |||
| + | * Teem has been under active development since 1998, and was partially funded by [[NAC|NAC]], a collaborating project, in 2004-2006. The Teem training and dissemination efforts have leveraged the infrastructure setup by NA-MIC. | ||
| + | * The NRRD file format (from Teem) is the basis of the [[NAMIC_Wiki:DTI:Nrrd_format|NA-MIC DWI format]]. | ||
| + | * A [http://public.kitware.com/dashboard.php?name=namic dashboard] has been set up to monitor compiler warnings and errors on a range of operating systems, platforms and compilers. | ||
| + | * Starting with Slicer 2.6, Teem is included and built with Slicer. Slicer can now link with the Teem libraries, and the command-line tools are accessible from Slicer's "tkcon" window. | ||
| + | * 3x3 tensor eigensolutions in Slicer are now based on Teem. | ||
| + | * A Slicer GUI was built around Teem's tractography method to permit detailed comparison and cross-validation with Slicer's existing tractography method. | ||
| + | * The [[Training:NIH_Workshop_2006|April 2006 Training Workshop at NIH]] included a section on using the "unu" and "tend" command-line tools to help import DWI and DTI into slicer. | ||
'''Key Investigators:''' | '''Key Investigators:''' | ||
| − | * | + | * BWH: Gordon Kindlmann, Steve Pieper, Raul San Jose |
| − | |||
| − | '''Links''' | + | '''Links:''' |
| − | * [[ | + | * [[TeemSummary|Teem Summary]] |
| − | * [[ | + | * [[NAMIC_Wiki:DTI:Nrrd_format|NRRD format for DWI and DTI]] |
| + | * [[AHM_2006:AHM_2006|January 2006: Second All-Hands-Meeting]]<nowiki>: </nowiki>[[NAMIC_Wiki:DTI:TeemExamples|Examples of using Teem for DWI processing]] | ||
| + | * [[Training:NIH_Workshop_2006|April 2006: Training Workshop at NIH]]<nowiki>: </nowiki>[[Media:NRRDTrainingV1.0.ppt| PPT on converting DTI data into Nrrd]] | ||
| + | * [[NA-MIC/Projects/Diffusion_Image_Analysis/Diffusion_measures_alongs_fiber_tracts_of_the_cingulum_bundle|Diffusion measures alongs fiber tracts of the cingulum bundle]] : Used Teem for tractography | ||
Revision as of 13:28, 18 December 2006
Home < NAObjective:
- Extend the power of Slicer3 by integrating the Teem libraries and command-line tools (e.g. "unu").
Progress:
- Teem has been under active development since 1998, and was partially funded by NAC, a collaborating project, in 2004-2006. The Teem training and dissemination efforts have leveraged the infrastructure setup by NA-MIC.
- The NRRD file format (from Teem) is the basis of the NA-MIC DWI format.
- A dashboard has been set up to monitor compiler warnings and errors on a range of operating systems, platforms and compilers.
- Starting with Slicer 2.6, Teem is included and built with Slicer. Slicer can now link with the Teem libraries, and the command-line tools are accessible from Slicer's "tkcon" window.
- 3x3 tensor eigensolutions in Slicer are now based on Teem.
- A Slicer GUI was built around Teem's tractography method to permit detailed comparison and cross-validation with Slicer's existing tractography method.
- The April 2006 Training Workshop at NIH included a section on using the "unu" and "tend" command-line tools to help import DWI and DTI into slicer.
Key Investigators:
- BWH: Gordon Kindlmann, Steve Pieper, Raul San Jose
Links:
