2009 Summer Project Week Extension Manager
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Key Investigators
Katie Hayes, BWH, Steve Pieper, Terry Lorber
Objectives
- Add functionality to the Slicer3 extension manager
- Help developers make their modules work as extensions
- Test extension implementation to generate feature/bug todo list.
Approach, Plan
- Information on using extensions will be given on Tuesday at 10:00. (Slides)
- Katie, Terry, and Steve will be available to work with developers to test build.
Progress
- Added Fuzzy Segmentation and Lesion Segmentation extensions to the SVN repository
- Demoed extension manager to developers and explained the process to make existing code available as a Slicer3 extension
- Meeting to discuss possible changes to the extension manager to support a wider variety of code
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References
Possible Extension Projects (Summer 2009)
- Lupus Lesion Segmentation (Jeremy Bockholt MRN)
- White Matter Lesion segmentation (Minjeong Kim UNC)
- Skull Stripping (Snehasish Roy JHU)
- Tubular Surface Segmentation in Slicer (Vandana Mohan, Georgia Tech)
- Cortical Thickness Pipeline (Clement Vachet UNC)
- Automatic brain MRI processing pipeline (Marcel Prastawa Utah)
- Spherical Mesh Diffeomorphic Demons Registration (Luis Ibanez Kitware)
- HAMMER Registration (Guorong Wu UNC)
- Meningioma growth simulation (Andrey Fedorov BWH)
- BSpline Registration in Slicer3 (Samuel Gerber Utah)
- Prostate Registration Slicer Module (Yi Gao, Georgia Tech)
- EPI Correction in Slicer3 (Ran Tao Utah)
- Slicer module for the computation of fibre dispersion and curving measures (Peter Savadjiev BWH)
- DWI/DTI QC and Preparation Tool: DTIPrep (Zhexing Liu UNC)
- Fluid mechanics tractography and visualization (Nathan Hageman UCLA)
- Transrectal Prostate Biopsy (Andras Lasso Queen's)
- Prostate Robotics (Junichi Tokuda BWH)
- Integration of Flexible Surgical Instrument Modeling and Virtual Catheter with Slicer (Jayender Jagadeesan BWH)
- MRSI Module (Bjoern Menze MIT)
- 4D Imaging (Perfusion, Cardiac, etc.) (Junichi Tokuda BWH)
- Gated 4D ultrasound reconstruction for Slicer3 (Danielle Pace Robarts Institute)
- Plug-in 3D Viewer based on XIP (Lining Yang Siemens Research)
- Extension of the Command Line XML Syntax/Interface (Bennett Landman)