Projects:RegistrationDocumentation:RegLibTable

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this page is under active development and is being updated regularly. Comments welcome to the slicer-users mailing list

Registration Library Cases : Sortable Table

to link to the library case page, click on the thumbnail image, to link to the toolbox documentation, click on the link in the toolbox column.

id thumbnail structure pathology DOF toolbox modality description status
1 RegLib C01: Tumor change assessment brain glioblastoma 12 Expert Automated MRI T1 change detection, tumor follow-up in revision
2 RegLib C02: MS multispectral alignment brain multiple sclerosis 12 Expert Automated MRI T2 FLAIR
3 RegLib C03: DTI alignment brain tumor nonrigid Fast Nonrigid BSpline DTI align DTI volume with structural reference scan (T2)
4 RegLib C04: MS Lesion baseline Brain multiple sclerosis 12 Expert Automated MRI PD/T2 T1Gd align 2 sets of multi-contrast MRI for lesion change assessment
5 RegLib 05: Knee MRI subject 1 knee N/A 12 + nonrigid Surface Registration MRI inter-subject alignment of knee MRI for atlas-based segmentation
6 RegLib 06: Breast MRI breast tumor 6 + nonrigid Manual + Fast Nonrigid BSpline MRI post-intervention assessment of breast cancer
7 RegLib 07: Prostate baseline prostate N/A 12 + nonrigid Fast Affine + Fast Nonrigid BSpline MRI change-assessment in post-intervention MRI follow-up
8 RegLib C08: PET-CT1 abdominal, thoracic path 12 + nonrigid Fast Affine + Fast Nonrigid BSpline PET-CT follow-up change assessment from combined whole-body PET-CT pair
9 RegLib 09: T1 SPGR brain infarct 12 + nonrigid Fast Affine + Fast Nonrigid BSpline fMRI align fMRI with structural reference (T1)
10 Probabilistic Tissue Atlas brain N/A 12 + nonrigid Fast Affine + Fast Nonrigid BSpline MRI align probabilistic tissue atlas with target brain for guiding EM tissue class segmentation
11
RegLib C11 AtlasMerge 1.png
brain none 12 Surface Registration MRI / labelmaps co-register surface models of thalamus for two separate subjects, merging anatomical labelmaps
12
RegLib C12 LiverTumor MRI.png
liver tumor nonrigid Fast Nonrigid BSpline MRI + CT Liver tumor ablation #1: intra-operative MRI to pre-op CT.
13
RegLib C13 LiverTumor2 CTpost.png
liver tumor nonrigid Fast Nonrigid BSpline CT + MRI Liver tumor ablation : post-operative CT to pre-op CT & MRI
14
RegLib C14 Thumb PET.png
brain N/A 12 [toollink toolname] PET + MRI alignment of brain PET to structural MRI, with adjustments to MRI aspect ratio and orientation.
15
RegLib C15 Thumb.png
brain none 6 AC-PC Transform MRI Realigning a single brain MRI along the anterior-posterior commissure line.
16
RegLib C16 Brain0.png
brain N/A 6 Manual Registration:Transforms MRI manually align FLAIR MRI with anatomical reference T1.
17 brain pathol DOF [toollink toolname] modality descr.
16 brain pathol DOF [toollink toolname] modality descr.
16 brain pathol DOF [toollink toolname] modality descr.
16 brain pathol DOF [toollink toolname] modality descr.